RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 RTP4Q96DX8 246 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 MRPL45Q9BRJ2 306 aaKnown RBP23.53■■□□□ 1.36
RCCD1-208ENST00000557266 PCDH18Q9HCL0 1135 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 NGRNQ9NPE2 291 aaKnown RBP23.53■■□□□ 1.36
RCCD1-208ENST00000557266 RAB6BQ9NRW1 208 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 MCM8Q9UJA3 840 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 NME7Q9Y5B8 376 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 KCNN4O15554 427 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 DCTN3O75935 186 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 EZRP15311 586 aaKnown RBP23.53■■□□□ 1.36
RCCD1-208ENST00000557266 ZNF200P98182 395 aaPredicted RBP23.53■■□□□ 1.36
RCCD1-208ENST00000557266 PTK7Q13308 1070 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 STILQ15468 1287 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 CA9Q16790 459 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 BOLA3Q53S33 107 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 VSIG1Q86XK7 387 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 MAP7D3Q8IWC1 876 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 PCDH19Q8TAB3 1148 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 UTP4Q969X6 686 aaKnown RBP23.53■■□□□ 1.36
RCCD1-208ENST00000557266 SERAC1Q96JX3 654 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 PAK5Q9P286 719 aa23.53■■□□□ 1.36
RCCD1-208ENST00000557266 PPEF2O14830 753 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 GABBR2O75899 941 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 MT-ND3P03897 115 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 IBSPP21815 317 aaPredicted RBP23.52■■□□□ 1.36
RCCD1-208ENST00000557266 ALDH3A1P30838 453 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 GRM5P41594 1212 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
RCCD1-208ENST00000557266 YWHAGP61981 247 aaKnown RBP eCLIP23.52■■□□□ 1.36
RCCD1-208ENST00000557266 SEPT7Q16181 437 aaKnown RBP23.52■■□□□ 1.36
RCCD1-208ENST00000557266 ZNF792Q3KQV3 632 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 MARCH8Q5T0T0 291 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 ACOT1Q86TX2 421 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 TEKT4Q8WW24 435 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 SLC4A5Q9BY07 1137 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 FAM49BQ9NUQ9 324 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 HEY1Q9Y5J3 304 aa23.52■■□□□ 1.36
RCCD1-208ENST00000557266 APOL1O14791 398 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 TGM2P21980 687 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 TARSP26639 723 aaKnown RBP23.51■■□□□ 1.35
RCCD1-208ENST00000557266 RBL1P28749 1068 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 GJA5P36382 358 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 ADCYAP1R1P41586 468 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 YWHAZP63104 245 aaKnown RBP23.51■■□□□ 1.35
RCCD1-208ENST00000557266 FAAP100Q0VG06 881 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 CBLBQ13191 982 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SLC9A4Q6AI14 798 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 USP6NLQ92738 828 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 EMID1Q96A84 441 aaPredicted RBP23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SNRNP25Q9BV90 132 aaKnown RBP23.51■■□□□ 1.35
RCCD1-208ENST00000557266 LRMDAQ9H2I8 198 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 NPHS2Q9NP85 383 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 L3MBTL1Q9Y468 752 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 PLXNA1Q9UIW2 1896 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 IQANK1A0A1B0GTG1 560 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 MAP3K6O95382 1288 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 C1QAP02745 245 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SDC4P31431 198 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 BCAR1P56945 870 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SLC6A3Q01959 620 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 PLEKHG4Q58EX7 1191 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SH2D5Q6ZV89 423 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 TMEM110Q86TL2 294 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SCUBE3Q8IX30 993 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 PTPRN2Q92932 1015 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 ZMAT2Q96NC0 199 aaKnown RBP23.51■■□□□ 1.35
RCCD1-208ENST00000557266 VPS11Q9H270 941 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 VTA1Q9NP79 307 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 SNX9Q9Y5X1 595 aa23.51■■□□□ 1.35
RCCD1-208ENST00000557266 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.5■■□□□ 1.35
RCCD1-208ENST00000557266 RBM47A0AV96 593 aaKnown RBP23.5■■□□□ 1.35
RCCD1-208ENST00000557266 H3BRB1 525 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 PAPSS1O43252 624 aaPredicted RBP23.5■■□□□ 1.35
RCCD1-208ENST00000557266 SPAG6O75602 509 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 ATP5HO75947 161 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 ADORA2AP29274 412 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 NEK3P51956 506 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 FAXCQ5TGI0 409 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 PRPF39Q86UA1 669 aaKnown RBP23.5■■□□□ 1.35
RCCD1-208ENST00000557266 STAMBPL1Q96FJ0 436 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 TMEM237Q96Q45 408 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 TUT1Q9H6E5 874 aaKnown RBP23.5■■□□□ 1.35
RCCD1-208ENST00000557266 CLEC11AQ9Y240 323 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 LPXNO60711 386 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 INHBAP08476 426 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 T-ENOLP0DO92 83 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 HDAC4P56524 1084 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 LRRN4Q8WUT4 740 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 SLC35F5Q8WV83 523 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 TBCBQ99426 244 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 KATNBL1Q9H079 304 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 MANSC1Q9H8J5 431 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 ALG13Q9NP73 1137 aaKnown RBP23.5■■□□□ 1.35
RCCD1-208ENST00000557266 HAO1Q9UJM8 370 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 TTLL3Q9Y4R7 772 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 IKBKGQ9Y6K9 419 aa23.5■■□□□ 1.35
RCCD1-208ENST00000557266 BCLAF3A2AJT9 711 aaKnown RBP23.49■■□□□ 1.35
RCCD1-208ENST00000557266 CFAP69A5D8W1 941 aa23.49■■□□□ 1.35
RCCD1-208ENST00000557266 C2CD2LO14523 706 aa23.49■■□□□ 1.35
RCCD1-208ENST00000557266 NPTXRO95502 500 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms