RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 YWHAEP62258 255 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 YWHAZP63104 245 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 FKBP1CQ5VVH2 108 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 CWF19L1Q69YN2 538 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 IZUMO2Q6UXV1 221 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 NUDCD3Q8IVD9 361 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 CEP120Q8N960 986 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 CMASQ8NFW8 434 aaPredicted RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 PRPF31Q8WWY3 499 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 IFT43Q96FT9 208 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ZCWPW1Q9H0M4 648 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 PLAC1Q9HBJ0 212 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 PCMTD2Q9NV79 361 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 WDR35Q9P2L0 1181 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ZC3H7BQ9UGR2 993 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 HMGXB4Q9UGU5 601 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 HEY1Q9Y5J3 304 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 MAFBQ9Y5Q3 323 aaPredicted RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 A8MXQ7 604 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 PRR5-ARHGAP8B1AHC4 643 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 SPATA31C2B4DYI2 1134 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ADCY3O60266 1144 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 RFPL1O75677 317 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 RNF8O76064 485 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 APRTP07741 180 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 SNRPAP09012 282 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 RAP1GDS1P52306 607 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ARHGAP8P85298 464 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ZRSR2Q15696 482 aaKnown RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 MROH9Q5TGP6 573 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ULK2Q8IYT8 1036 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 ARHGAP24Q8N264 748 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 CCDC33Q8N5R6 958 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 TWNKQ96RR1 684 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 FRMD8P1Q9BZ68 369 aaPredicted RBP11.85□□□□□ -0.51
SRP54-213ENST00000556994 XYLT2Q9H1B5 865 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 SLC7A8Q9UHI5 535 aa11.85□□□□□ -0.51
SRP54-213ENST00000556994 SPECC1L-ADORA2AF8WAN1 911 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 MAGEC1O60732 1142 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 KRT37O76014 449 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 SNUPNO95149 360 aaKnown RBP11.84□□□□□ -0.51
SRP54-213ENST00000556994 APBA3O96018 575 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 NOMO1Q15155 1222 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 LRRC36Q1X8D7 754 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 FAM102AQ5T9C2 384 aaPredicted RBP11.84□□□□□ -0.51
SRP54-213ENST00000556994 C1orf146Q5VVC0 180 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 TRMT10BQ6PF06 316 aaKnown RBP11.84□□□□□ -0.51
SRP54-213ENST00000556994 UBA3Q8TBC4 463 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 MMP19Q99542 508 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 GPATCH2LQ9NWQ4 482 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 PPM1HQ9ULR3 514 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 PLA2G4CQ9UP65 541 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 COL4A5P29400 1685 aa11.84□□□□□ -0.51
SRP54-213ENST00000556994 KLF11O14901 512 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 MSCO60682 206 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 PEX10O60683 326 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 TM7SF2O76062 418 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 CSH1P0DML2 217 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 CSH2P0DML3 217 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 TSHRP16473 764 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 RBL1P28749 1068 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.51
SRP54-213ENST00000556994 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 TEX44Q53QW1 395 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 CAND1Q86VP6 1230 aaKnown RBP11.83□□□□□ -0.51
SRP54-213ENST00000556994 TMEM192Q8IY95 271 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 NDUFAF2Q8N183 169 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 GALNT15Q8N3T1 639 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 TTLL6Q8N841 843 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 PIWIL1Q96J94 861 aaKnown RBP11.83□□□□□ -0.51
SRP54-213ENST00000556994 FGD4Q96M96 766 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 SDCBP2Q9H190 292 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 RSAD1Q9HA92 442 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 USP29Q9HBJ7 922 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 TAGLN3Q9UI15 199 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 KCNG1Q9UIX4 513 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 MAD1L1Q9Y6D9 718 aa11.83□□□□□ -0.51
SRP54-213ENST00000556994 TOM1L1O75674 476 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 CIB2O75838 187 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 HOXC6P09630 235 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 RAB27AP51159 221 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 SLC25A3Q00325 362 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 RBBP5Q15291 538 aaKnown RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 SMAD1Q15797 465 aaKnown RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 ATG16L1Q676U5 607 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 TRNP1Q6NT89 227 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 SCYL2Q6P3W7 929 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 NET1Q7Z628 596 aaPredicted RBP11.83□□□□□ -0.52
SRP54-213ENST00000556994 CRLF3Q8IUI8 442 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 MPP5Q8N3R9 675 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 LRRC71Q8N4P6 559 aa11.83□□□□□ -0.52
SRP54-213ENST00000556994 GSTCDQ8NEC7 633 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms