RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 SLC4A5Q9BY07 1137 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 MIS12Q9H081 205 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 LHX5Q9H2C1 402 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 SMPD4Q9NXE4 827 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 NUDT5Q9UKK9 219 aa18.38■□□□□ 0.53
SHMT2-225ENST00000556798 CUL9Q8IWT3 2517 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 SOBPA7XYQ1 873 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 E5RJQ4 531 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 TNFRSF10AO00220 468 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 DPYSL4O14531 572 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 TLR5O60602 858 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 OLFM2O95897 454 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 MBL2P11226 248 aaPredicted RBP18.37■□□□□ 0.53
SHMT2-225ENST00000556798 RARGP13631 454 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 FERP16591 822 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 WEE1P30291 646 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 DAOAP59103 153 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 YWHAGP61981 247 aaKnown RBP eCLIP18.37■□□□□ 0.53
SHMT2-225ENST00000556798 FMO1Q01740 532 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 CDR2Q01850 454 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 FIGNQ5HY92 759 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 PM20D1Q6GTS8 502 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 CPXM1Q96SM3 734 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 NUP58Q9BVL2 599 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 CNGB3Q9NQW8 809 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 TDP1Q9NUW8 608 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 CEP83Q9Y592 693 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 ITIH6Q6UXX5 1313 aa18.37■□□□□ 0.53
SHMT2-225ENST00000556798 YJEFN3A6XGL0 299 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 E7ENQ6 273 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 MDM4O15151 490 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 TBX18O95935 607 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 GYPCP04921 128 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 RPL34P49207 117 aaKnown RBP18.36■□□□□ 0.53
SHMT2-225ENST00000556798 TUBP50607 506 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 ZXDBP98169 803 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 COL4A3Q01955 1670 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 ASIC2Q16515 512 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 PTPN20Q4JDL3 420 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 SFMBT2Q5VUG0 894 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 SARM1Q6SZW1 724 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 HFE2Q6ZVN8 426 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 SCUBE3Q8IX30 993 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 CELF5Q8N6W0 485 aaKnown RBP18.36■□□□□ 0.53
SHMT2-225ENST00000556798 TMEM35BQ8NCS4 154 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 STK32AQ8WU08 396 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 PPP1R13BQ96KQ4 1090 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 ANP32EQ9BTT0 268 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 TRIM5Q9C035 493 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 NACA2Q9H009 215 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 CYLDQ9NQC7 956 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
SHMT2-225ENST00000556798 ARHGAP26Q9UNA1 814 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 CPQQ9Y646 472 aa18.36■□□□□ 0.53
SHMT2-225ENST00000556798 PAPSS1O43252 624 aaPredicted RBP18.35■□□□□ 0.53
SHMT2-225ENST00000556798 DCXO43602 365 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 ERBB2P04626 1255 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 PFKLP17858 780 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 PSMC3P17980 439 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 CDH5P33151 784 aaPredicted RBP18.35■□□□□ 0.53
SHMT2-225ENST00000556798 ACADSBP45954 432 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 PSEN1P49768 467 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 NOMO3P69849 1222 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 SLC7A9P82251 487 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 ZNF268Q14587 947 aaPredicted RBP18.35■□□□□ 0.53
SHMT2-225ENST00000556798 NAA35Q5VZE5 725 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 IRF2BP2Q7Z5L9 587 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 ZNF677Q86XU0 584 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 VSTM4Q8IW00 320 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 ARHGAP18Q8N392 663 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 SH3RF2Q8TEC5 729 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 EDEM1Q92611 657 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 ZFYVE19Q96K21 471 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 NOX5Q96PH1 765 aa18.35■□□□□ 0.53
SHMT2-225ENST00000556798 SEPT11Q9NVA2 429 aaKnown RBP18.35■□□□□ 0.53
SHMT2-225ENST00000556798 TECTAO75443 2155 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 MYOFQ9NZM1 2061 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 A0A1W2PQJ5 194 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 SCAMP3O14828 347 aaKnown RBP18.34■□□□□ 0.53
SHMT2-225ENST00000556798 FBXO21O94952 628 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 RALAP11233 206 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 GDI1P31150 447 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 CASP14P31944 242 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 GPC5P78333 572 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 ZXDAP98168 799 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 USP4Q13107 963 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 ZNF77Q15935 545 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 C10orf120Q5SQS8 335 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 BTBD8Q5XKL5 378 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 SPECC1LQ69YQ0 1117 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 TMEM110Q86TL2 294 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 MFSD6LQ8IWD5 586 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 SCML4Q8N228 414 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 BPIFB1Q8TDL5 484 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 DEPDC1BQ8WUY9 529 aa18.34■□□□□ 0.53
SHMT2-225ENST00000556798 CPA5Q8WXQ8 436 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms