RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CEP290O15078 2479 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 A0A0A6YYJ9 748 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 MYADML2A6NDP7 307 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 H0YGN5 161 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 DNM1LO00429 736 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 DAPK3O43293 454 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 MARCH6O60337 910 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 PQBP1O60828 265 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CDKL5O76039 1030 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 PRPF6O94906 941 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 ASMTLO95671 621 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 GH1P01241 217 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 JUNP05412 331 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 ASGR1P07306 291 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 SCG2P13521 617 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 HNRNPLP14866 589 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CAPN2P17655 700 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 XBP1P17861 261 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 MAN2A2P49641 1150 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 HSD17B4P51659 736 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 ACLYP53396 1101 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 RABGGTBP53611 331 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 PSMC6P62333 389 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 SLC25A3Q00325 362 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 TRIM29Q14134 588 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 FSCN1Q16658 493 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 PFKFB3Q16875 520 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 FKBP15Q5T1M5 1219 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 UTP14CQ5TAP6 766 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CXCL17Q6UXB2 119 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 SLC39A5Q6ZMH5 540 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 ZNF662Q6ZS27 426 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 TRMT1LQ7Z2T5 733 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 TLK2Q86UE8 772 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CCDC83Q8IWF9 413 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 C7orf31Q8N865 590 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 SCFD2Q8WU76 684 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 GLT1D1Q96MS3 346 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 LBHD1Q9BQE6 289 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 STARD7Q9NQZ5 370 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 SLC2A4RGQ9NR83 387 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 INTS7Q9NVH2 962 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 OXSMQ9NWU1 459 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 MAP3K20Q9NYL2 800 aaKnown RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 MAGEC2Q9UBF1 373 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-243ENST00000556671 NRBP1Q9UHY1 535 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 CENPFP49454 3210 aa5.28□□□□□ -1.56
ATXN3-243ENST00000556671 ASTN1O14525 1302 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 DDX39AO00148 427 aaKnown RBP5.27□□□□□ -1.57
ATXN3-243ENST00000556671 MEIS2O14770 477 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 MAFGO15525 162 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 ADCY6O43306 1168 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 MTSS1O43312 755 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 PFKFB2O60825 505 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 DEXIO95424 95 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 GGPS1O95749 300 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 GNA11P29992 359 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 KIR2DL3P43628 341 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 CPT1AP50416 773 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 GUCY1B3Q02153 619 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 ME3Q16798 604 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 LRRC26Q2I0M4 334 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 DUSP28Q4G0W2 176 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 KRT40Q6A162 431 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 MFSD5Q6N075 450 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 KIAA1841Q6NSI8 718 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 TIGD7Q6NT04 549 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-243ENST00000556671 KCNV1Q6PIU1 500 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 HTR3DQ70Z44 454 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 ZNF627Q7L945 461 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 GSPT2Q8IYD1 628 aaKnown RBP5.27□□□□□ -1.57
ATXN3-243ENST00000556671 ZZZ3Q8IYH5 903 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 SAMD3Q8N6K7 520 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 FAM184AQ8NB25 1140 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 IL31RAQ8NI17 732 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 BICD2Q8TD16 824 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 AFG1LQ8WV93 481 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 SPATA33Q96N06 139 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 PDCD2LQ9BRP1 358 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 OSBPL6Q9BZF3 934 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 MTG2Q9H4K7 406 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 RIC8AQ9NPQ8 531 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 BARHL2Q9NY43 387 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 C11orf21Q9P2W6 132 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 ORC3Q9UBD5 711 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-243ENST00000556671 TCEAL9Q9UHQ7 104 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 KCNJ14Q9UNX9 436 aa5.27□□□□□ -1.57
ATXN3-243ENST00000556671 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
ATXN3-243ENST00000556671 REXO2Q9Y3B8 237 aaKnown RBP5.27□□□□□ -1.57
ATXN3-243ENST00000556671 TNRC18O15417 2968 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-243ENST00000556671 A0A087X1B8 175 aa5.26□□□□□ -1.57
ATXN3-243ENST00000556671 A0A0A6YYK5 440 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-243ENST00000556671 LOC102724159A0A0B4J2E5 919 aa5.26□□□□□ -1.57
ATXN3-243ENST00000556671 ADAMTS3O15072 1205 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms