RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PLA2G4AP47712 749 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 POLR2FP61218 127 aaKnown RBP17.97■□□□□ 0.47
PSEN1-217ENST00000556533 TPM4P67936 248 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 ZNF77Q15935 545 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 RAB41Q5JT25 222 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 C10orf120Q5SQS8 335 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 APTXQ7Z2E3 356 aaKnown RBP17.97■□□□□ 0.47
PSEN1-217ENST00000556533 SLC47A2Q86VL8 602 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 NEK11Q8NG66 645 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 SLC35F5Q8WV83 523 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 STK33Q9BYT3 514 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 EBF3Q9H4W6 596 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 NLRC4Q9NPP4 1024 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 PLCB1Q9NQ66 1216 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 ST7Q9NRC1 585 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 DUS2Q9NX74 493 aaKnown RBP17.97■□□□□ 0.47
PSEN1-217ENST00000556533 GTSE1Q9NYZ3 720 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 WNT6Q9Y6F9 365 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
PSEN1-217ENST00000556533 PTPRDP23468 1912 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 MDM4O15151 490 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 OLFM2O95897 454 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 IRF1P10914 325 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 ARSAP15289 507 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 CLCN1P35523 988 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 KRT9P35527 623 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 ATP5C1P36542 298 aaKnown RBP17.96■□□□□ 0.47
PSEN1-217ENST00000556533 SOX9P48436 509 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 IFNAR2P48551 515 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 TUBP50607 506 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 YWHAGP61981 247 aaKnown RBP eCLIP17.96■□□□□ 0.47
PSEN1-217ENST00000556533 ZXDBP98169 803 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 PRKCQQ04759 706 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 FILIP1LQ4L180 1135 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 ASTLQ6HA08 431 aaPredicted RBP17.96■□□□□ 0.47
PSEN1-217ENST00000556533 PASD1Q8IV76 773 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 FAM71AQ8IYT1 594 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 ARHGAP18Q8N392 663 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 KCTD13Q8WZ19 329 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 FAM83CQ9BQN1 747 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 NAA15Q9BXJ9 866 aaKnown RBP17.96■□□□□ 0.47
PSEN1-217ENST00000556533 FOXQ1Q9C009 403 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 MIS12Q9H081 205 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 GANQ9H2C0 597 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 PDCL3Q9H2J4 239 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 LINC00597Q9H2U6 94 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 SIK3Q9Y2K2 1263 aa17.96■□□□□ 0.47
PSEN1-217ENST00000556533 GOLGA6L19H0YKK7 550 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 ARNTLO00327 626 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 EPHB6O15197 1021 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 TEX33O43247 280 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 PI15O43692 258 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 SERPINC1P01008 464 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 GPD2P43304 727 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 PSEN1P49768 467 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 VCPP55072 806 aaKnown RBP17.95■□□□□ 0.46
PSEN1-217ENST00000556533 STARD6P59095 220 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 BPIFB4P59827 614 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 USP4Q13107 963 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 ITPRIPL2Q3MIP1 535 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 ZNF852Q6ZMS4 543 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 RSRC2Q7L4I2 434 aaKnown RBP17.95■□□□□ 0.46
PSEN1-217ENST00000556533 TADA2BQ86TJ2 420 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 TRPV5Q9NQA5 729 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.95■□□□□ 0.46
PSEN1-217ENST00000556533 SH3BP1Q9Y3L3 701 aa17.95■□□□□ 0.46
PSEN1-217ENST00000556533 FAM170BA6NMN3 283 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 YJEFN3A6XGL0 299 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 E7ENQ6 273 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 F8VZ95 297 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 GABBR2O75899 941 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 GFPT2O94808 682 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 CAVIN2O95810 425 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 AVPR2P30518 371 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 CLCN5P51795 746 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 EFEMP1Q12805 493 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 RUNX3Q13761 415 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 PDGFRLQ15198 375 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 TAF3Q5VWG9 929 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 BTBD8Q5XKL5 378 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 CWF19L1Q69YN2 538 aaKnown RBP17.94■□□□□ 0.46
PSEN1-217ENST00000556533 PM20D1Q6GTS8 502 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 DDX42Q86XP3 938 aaKnown RBP eCLIP17.94■□□□□ 0.46
PSEN1-217ENST00000556533 MIB1Q86YT6 1006 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 SCUBE3Q8IX30 993 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 OSCP1Q8WVF1 389 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 EDEM1Q92611 657 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 HSFY1Q96LI6 401 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 SPAG5Q96R06 1193 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 RTN4Q9NQC3 1192 aaKnown RBP17.94■□□□□ 0.46
PSEN1-217ENST00000556533 CYLDQ9NQC7 956 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 CLIC5Q9NZA1 410 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 DNMT3LQ9UJW3 386 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 NDRG2Q9UN36 371 aaKnown RBP17.94■□□□□ 0.46
PSEN1-217ENST00000556533 SIT1Q9Y3P8 196 aa17.94■□□□□ 0.46
PSEN1-217ENST00000556533 MTF2Q9Y483 593 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-217ENST00000556533 TECTAO75443 2155 aa17.93■□□□□ 0.46
PSEN1-217ENST00000556533 KANSL1LA0AUZ9 987 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms