RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 RWDD3Q9Y3V2 267 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PCDHB14Q9Y5E9 798 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 DMRT1Q9Y5R6 373 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 COL17A1Q9UMD9 1497 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 EFCAB5A4FU69 1503 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MAP3K1Q13233 1512 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 RTEL1-TNFRSF6BF6WH68 1400 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 NUP160Q12769 1436 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 CCDC78A2IDD5 438 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TYW5A2RUC4 315 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 DBX1A6NMT0 343 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TARM1B6A8C7 271 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 AKAP10O43572 662 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 SSX5O60225 188 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 UFL1O94874 794 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PRPF6O94906 941 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 ASGR1P07306 291 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ZBTB48P10074 688 aaPredicted RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 KRT5P13647 590 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TRIM27P14373 513 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 GLB1P16278 677 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ZNF12P17014 697 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PKLRP30613 574 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 GRK4P32298 578 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PCK1P35558 622 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 RGS2P41220 211 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 AFMP43652 599 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PREPP48147 710 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 STARP49675 285 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 NKX3-2P78367 333 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 RIPPLY1Q0D2K3 151 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 FCHO2Q0JRZ9 810 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 CDC16Q13042 620 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 SMAD4Q13485 552 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 SCARB2Q14108 478 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 GFOD2Q3B7J2 385 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MAJINQ3KP22 176 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ANKRD20A2Q5SQ80 823 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ANKRD20A1Q5TYW2 823 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ANKRD20A3Q5VUR7 823 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PM20D1Q6GTS8 502 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TMEM154Q6P9G4 183 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MACC1Q6ZN28 852 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 GK5Q6ZS86 529 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 C15orf52Q6ZUT6 534 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 STOX1Q6ZVD7 989 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 OTOP3Q7RTS5 596 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 KRT74Q7RTS7 529 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 KCTD20Q7Z5Y7 419 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ADAMTSL2Q86TH1 951 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 HEATR4Q86WZ0 1026 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 VSIG1Q86XK7 387 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 CAMK1DQ8IU85 385 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MMAAQ8IVH4 418 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 LRRC8AQ8IWT6 810 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 NUP93Q8N1F7 819 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ELMOD1Q8N336 334 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 FAM26EQ8N5C1 309 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MLKLQ8NB16 471 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MYCBPAPQ8TBZ2 947 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 SLC2A14Q8TDB8 520 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 FAM216AQ8WUB2 273 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TRIM63Q969Q1 353 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 LRRC59Q96AG4 307 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 CHMP6Q96FZ7 201 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 FAM46AQ96IP4 442 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 COX4I2Q96KJ9 171 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 UBL7Q96S82 380 aaPredicted RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 SH3GL2Q99962 352 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ELAC2Q9BQ52 826 aaKnown RBP6.45□□□□□ -1.38
TDP1-215ENST00000556498 HEPHQ9BQS7 1158 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 WNT10AQ9GZT5 417 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 EPN3Q9H201 632 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TMEM245Q9H330 911 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TM9SF3Q9HD45 589 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PAG1Q9NWQ8 432 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 NMRK1Q9NWW6 199 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PTTG2Q9NZH5 202 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 DTLQ9NZJ0 730 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 COX16Q9P0S2 106 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ZNHIT2Q9UHR6 403 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 MOSPD1Q9UJG1 213 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 PPT2Q9UMR5 302 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 INVSQ9Y283 1065 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 STK38LQ9Y2H1 464 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 CORINQ9Y5Q5 1042 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 ACTL7BQ9Y614 415 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 AP1M2Q9Y6Q5 423 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 TTC21AQ8NDW8 1320 aa6.45□□□□□ -1.38
TDP1-215ENST00000556498 CPSF1Q10570 1443 aaKnown RBP6.44□□□□□ -1.38
TDP1-215ENST00000556498 FMN1Q68DA7 1419 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 UACAQ9BZF9 1416 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 A0A0A6YYJ9 748 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 A0A0B4J269 797 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 FAM237AA0A1B0GTK4 181 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 E2F8A0AVK6 867 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 PRAMEF27A3QJZ7 478 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 TRPC5OSA6NMA1 111 aa6.44□□□□□ -1.38
TDP1-215ENST00000556498 SLCO1B7G3V0H7 640 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms