RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 WDR19Q8NEZ3 1342 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 SCN5AQ14524 2016 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 RHOBTB3O94955 611 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 IQCF3P0C7M6 154 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 KRT4P19013 534 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 CHMLP26374 656 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 CCND2P30279 289 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 HOXA13P31271 388 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 HSPA4P34932 840 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 NOVP48745 357 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 NEK4P51957 841 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 TOB2Q14106 344 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 WTAPQ15007 396 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 PTPAQ15257 358 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 LONRF2Q1L5Z9 754 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 TMEM177Q53S58 311 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 ZC3H12BQ5HYM0 836 aaKnown RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 PRAMEF9Q5VWM5 478 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 SLFN12LQ6IEE8 588 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 OVCH1Q7RTY7 1134 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 ELOA2Q8IYF1 753 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 BCL6BQ8N143 479 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 ENAHQ8N8S7 591 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 IGSF22Q8N9C0 903 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 USP38Q8NB14 1042 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 CAGE1Q8TC20 777 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 PHOSPHO2Q8TCD6 241 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 ANKS1AQ92625 1134 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 DLG3Q92796 817 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 TMX3Q96JJ7 454 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 SPATA33Q96N06 139 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 NAP1L5Q96NT1 182 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-240ENST00000556339 ASB2Q96Q27 587 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 GPHA2Q96T91 129 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 KATNAL1Q9BW62 490 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 BOCQ9BWV1 1114 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 PANK2Q9BZ23 570 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 MAF1Q9H063 256 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 WNT8AQ9H1J5 351 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 EPC1Q9H2F5 836 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 PDCL3Q9H2J4 239 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 JMJD4Q9H9V9 463 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 SIRPGQ9P1W8 387 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 THEGQ9P2T0 379 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 HDAC6Q9UBN7 1215 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 NEDD4P46934 1319 aa4.44□□□□□ -1.7
ATXN3-240ENST00000556339 KIAA1217Q5T5P2 1943 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ABHD14A-ACY1A0A1B0GW23 586 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 UBA6A0AVT1 1052 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 C2orf78A6NCI8 922 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ZBTB5O15062 677 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PPFIA4O75335 1185 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 TOX4O94842 621 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ARIH2O95376 493 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PARNO95453 639 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 NPTXRO95502 500 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 GGPS1O95749 300 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 CAVIN2O95810 425 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PRLP01236 227 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 CA3P07451 260 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 MMP3P08254 477 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 SNHG28P0DPA3 235 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 EDNRBP24530 442 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 THPOP40225 353 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 KIF11P52732 1056 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 HMGN5P82970 282 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 SP4Q02446 784 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 KIAA0753Q2KHM9 967 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 GAGE13Q4V321 117 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 RABL3Q5HYI8 236 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 LY6G5CQ5SRR4 150 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 UTP14CQ5TAP6 766 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 CAVIN1Q6NZI2 390 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 CC2D1AQ6P1N0 951 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 CCDC62Q6P9F0 684 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 SYNE3Q6ZMZ3 975 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 HERC6Q8IVU3 1022 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 TMTC2Q8N394 836 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 SAMD3Q8N6K7 520 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PLA2G15Q8NCC3 412 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 NCOA7Q8NI08 942 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 CTCFLQ8NI51 663 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PROKR1Q8TCW9 393 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 AFAP1L1Q8TED9 768 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ATP6V0A1Q93050 837 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 RRP36Q96EU6 259 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 DYDC2Q96IM9 177 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 WDR92Q96MX6 357 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PIGSQ96S52 555 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 MNTQ99583 582 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 RAD9AQ99638 391 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 PXMP2Q9NR77 195 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 POLR3BQ9NW08 1133 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 MAP3K20Q9NYL2 800 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 SEC63Q9UGP8 760 aaKnown RBP4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ZNHIT2Q9UHR6 403 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 DNAI1Q9UI46 699 aa4.43□□□□□ -1.7
ATXN3-240ENST00000556339 ZKSCAN5Q9Y2L8 839 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms