RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SYNCQ9H7C4 482 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 NEUROD4Q9HD90 331 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 ZDHHC18Q9NUE0 388 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 RNF186Q9NXI6 227 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 WHRNQ9P202 907 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 SRRDQ9UH36 339 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 GIT1Q9Y2X7 761 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 HES2Q9Y543 173 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 SNX9Q9Y5X1 595 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 GRIN2DO15399 1336 aa8.72□□□□□ -1.01
ATXN3-235ENST00000556082 F8VP50 259 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 M0QYV0 167 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PTGESO14684 152 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PPEF2O14830 753 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PPFIA2O75334 1257 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TJP3O95049 919 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ECEL1O95672 775 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ASGR1P07306 291 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 RALAP11233 206 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ITIH2P19823 946 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CD33P20138 364 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PSMA2P25787 234 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 RPL9P32969 192 aaKnown RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 GNL1P36915 607 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 RAB27AP51159 221 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 LILRA4P59901 499 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CAV1Q03135 178 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 LMNB2Q03252 620 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PTK7Q13308 1070 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 HLTFQ14527 1009 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 DSC3Q14574 896 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 HADHQ16836 314 aaKnown RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 DEFB115Q30KQ5 88 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CFAP58Q5T655 872 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CYP4A22Q5TCH4 519 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 EMC10Q5UCC4 262 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ZDHHC24Q6UX98 284 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CHSY3Q70JA7 882 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ADAT2Q7Z6V5 191 aaKnown RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CCDC105Q8IYK2 499 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ARFGAP1Q8N6T3 406 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ANKRD52Q8NB46 1076 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TSEN2Q8NCE0 465 aaKnown RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ARRDC4Q8NCT1 418 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CMASQ8NFW8 434 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 SPATA18Q8TC71 538 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 GRK7Q8WTQ7 553 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PPP1R13LQ8WUF5 828 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 EXOC4Q96A65 974 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TNIP3Q96KP6 325 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CAPNS2Q96L46 248 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 HSFY1Q96LI6 401 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 GDAP1L1Q96MZ0 367 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 SLITRK1Q96PX8 696 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 CNPY3Q9BT09 278 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 DCLK3Q9C098 648 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TSPYL1Q9H0U9 437 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 FAM105AQ9NUU6 356 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 ASNSD1Q9NWL6 643 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 PSD3Q9NYI0 1048 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 GRHL1Q9NZI5 618 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 HESX1Q9UBX0 185 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 TSPAN16Q9UKR8 245 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 DRG1Q9Y295 367 aaKnown RBP8.71□□□□□ -1.02
ATXN3-235ENST00000556082 USTQ9Y2C2 406 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 NEU2Q9Y3R4 380 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 NME7Q9Y5B8 376 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 SCN10AQ9Y5Y9 1956 aa8.71□□□□□ -1.02
ATXN3-235ENST00000556082 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 C3orf70A6NLC5 250 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-235ENST00000556082 C2CD4BA6NLJ0 364 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 A8MXQ7 604 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 GOLGA8KD6RF30 607 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 GABRDO14764 452 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 HUS1O60921 280 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 LRCH4O75427 683 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 ENDOD1O94919 500 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 GJB6O95452 261 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 GAS8O95995 478 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 ALAS2P22557 587 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 CCND3P30281 292 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-235ENST00000556082 MAP2K2P36507 400 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 CDKN2BP42772 138 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 ACADSBP45954 432 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 PRMT2P55345 433 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 SLC25A11Q02978 314 aaKnown RBP8.7□□□□□ -1.02
ATXN3-235ENST00000556082 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-235ENST00000556082 PTK6Q13882 451 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 PTGISQ16647 500 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 TRIM71Q2Q1W2 868 aaKnown RBP8.7□□□□□ -1.02
ATXN3-235ENST00000556082 GOLGA7BQ2TAP0 167 aa8.7□□□□□ -1.02
ATXN3-235ENST00000556082 TFDP3Q5H9I0 405 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms