RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GTPBP4Q9BZE4 634 aaKnown RBP8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 SMYD3Q9H7B4 428 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 SPHK2Q9NRA0 654 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 TMEM30AQ9NV96 361 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 CFAP97Q9P2B7 532 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 DEC1Q9P2X7 70 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 SCML2Q9UQR0 700 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 PCDHA5Q9Y5H7 936 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 SPTBN2O15020 2390 aa8.24□□□□□ -1.09
PTCSC3-201ENST00000556013 OBSL1O75147 1896 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 TLR5O60602 858 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 CAVIN2O95810 425 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 HLA-DRAP01903 254 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 FAM200BP0CF97 657 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 ADH5P11766 374 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 KRT13P13646 458 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 ZNF132P52740 706 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 NDST1P52848 882 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 DLG4P78352 724 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 GOLGA8FQ08AF8 430 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 GOLGA8DPQ0D2H9 430 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 DPYDQ12882 1025 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 PKP1Q13835 747 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 COBLL1Q53SF7 1204 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 C2orf27AQ580R0 203 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 PPM1JQ5JR12 505 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 LY6G5CQ5SRR4 150 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 C1orf220Q5T0J3 134 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 STPG1Q5TH74 334 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 FOXD4L5Q5VV16 416 aaPredicted RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 CEP135Q66GS9 1140 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 PMS2CLQ68D20 193 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 KRT39Q6A163 491 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 KRBA2Q6ZNG9 492 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 ACOT1Q86TX2 421 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 PHTF2Q8N3S3 785 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 IL17RCQ8NAC3 791 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 SCAMP5Q8TAC9 235 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 SLC2A14Q8TDB8 520 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 FOXD4L4Q8WXT5 416 aaPredicted RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 XPO6Q96QU8 1125 aaKnown RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 HHIPQ96QV1 700 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 SMOQ99835 787 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 KLF16Q9BXK1 252 aaPredicted RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 SDCBP2Q9H190 292 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 ARHGEF4Q9NR80 690 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 CLIC5Q9NZA1 410 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 MARK1Q9P0L2 795 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 WDR35Q9P2L0 1181 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 EVLQ9UI08 416 aaPredicted RBP8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 ZNF510Q9Y2H8 683 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 USP3Q9Y6I4 520 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 PTPRDP23468 1912 aa8.23□□□□□ -1.09
PTCSC3-201ENST00000556013 TBC1D3BA6NDS4 549 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 GFRA2O00451 464 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 KHNYNO15037 678 aaKnown RBP8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 NPC1O15118 1278 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 GDF9O60383 454 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 STX10O60499 249 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 GREM1O60565 184 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 CILPO75339 1184 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 BEST1O76090 585 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 ZNF202O95125 648 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 CHRM1P11229 460 aaPredicted RBP8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 NR2F2P24468 414 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 HOXC13P31276 330 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 HOXD12P35452 270 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 P2RY2P41231 377 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 ASPAP45381 313 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 SLC6A11P48066 632 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 NDUFA8P51970 172 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 KIF11P52732 1056 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 MAP3K7CLP57077 242 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 COG7P83436 770 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 SHC2P98077 582 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 DAB2IPQ5VWQ8 1189 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 NAIF1Q69YI7 327 aaPredicted RBP8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 TMEM92Q6UXU6 159 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 CLEC20AQ6ZU45 233 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 GRAMD1CQ8IYS0 662 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 TXNDC5Q8NBS9 432 aaKnown RBP8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 TTC16Q8NEE8 873 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 DUSP16Q9BY84 665 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 NACA2Q9H009 215 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 TMEM8AQ9HCN3 771 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 KRT82Q9NSB4 513 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 SMPD4Q9NXE4 827 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 LSM7Q9UK45 103 aaKnown RBP8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 FBXO10Q9UK96 956 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 ZDHHC9Q9Y397 364 aa8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 MYO18AQ92614 2054 aaKnown RBP8.22□□□□□ -1.09
PTCSC3-201ENST00000556013 ABCA7Q8IZY2 2146 aa8.21□□□□□ -1.09
PTCSC3-201ENST00000556013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms