RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 RUNX3Q13761 415 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 ZNF77Q15935 545 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 FILIP1LQ4L180 1135 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 TTC30AQ86WT1 665 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 SCML4Q8N228 414 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 RSPRY1Q96DX4 576 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 NOX5Q96PH1 765 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 FAM83CQ9BQN1 747 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 IER2Q9BTL4 223 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 VPS16Q9H269 839 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 OLA1Q9NTK5 396 aaKnown RBP24.07■■□□□ 1.44
CDKN3-208ENST00000555837 DNMT3LQ9UJW3 386 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 LSM7Q9UK45 103 aaKnown RBP24.07■■□□□ 1.44
CDKN3-208ENST00000555837 CCL26Q9Y258 94 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 SH3BP1Q9Y3L3 701 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 CPQQ9Y646 472 aa24.07■■□□□ 1.44
CDKN3-208ENST00000555837 E2F8A0AVK6 867 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 LRRC10BA6NIK2 292 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 LEFTY2O00292 366 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 ARNTLO00327 626 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 COCHO43405 550 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 UBXN2BQ14CS0 331 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 GPIHBP1Q8IV16 184 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 FMNL3Q8IVF7 1028 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 PJA1Q8NG27 643 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 CCDC26Q8TAB7 109 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 STK32AQ8WU08 396 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 FAM3CQ92520 227 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 STRIP2Q9ULQ0 834 aa24.06■■□□□ 1.44
CDKN3-208ENST00000555837 RNF225M0QZC1 329 aaPredicted RBP24.05■■□□□ 1.44
CDKN3-208ENST00000555837 CYP26A1O43174 497 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 THAP12O43422 761 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 PDGFBP01127 241 aaPredicted RBP24.05■■□□□ 1.44
CDKN3-208ENST00000555837 LRRC32Q14392 662 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 KLHDC7AQ5VTJ3 777 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 PM20D1Q6GTS8 502 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 RSRC2Q7L4I2 434 aaKnown RBP24.05■■□□□ 1.44
CDKN3-208ENST00000555837 AOPEPQ8N6M6 819 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 TTC16Q8NEE8 873 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 UBA3Q8TBC4 463 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 SLC35F5Q8WV83 523 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 ZNF606Q8WXB4 792 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 IRGQQ8WZA9 623 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 PCMTD1Q96MG8 357 aaPredicted RBP24.05■■□□□ 1.44
CDKN3-208ENST00000555837 SLC22A12Q96S37 553 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 RNF38Q9H0F5 515 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 LTB4R2Q9NPC1 389 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 PATJQ8NI35 1801 aa24.05■■□□□ 1.44
CDKN3-208ENST00000555837 TRIOO75962 3097 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 ANAPC1Q9H1A4 1944 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 FAM170BA6NMN3 283 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 RARGP13631 454 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 BRD2P25440 801 aaKnown RBP24.04■■□□□ 1.44
CDKN3-208ENST00000555837 KRT9P35527 623 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 COPB1P53618 953 aaKnown RBP24.04■■□□□ 1.44
CDKN3-208ENST00000555837 COG7P83436 770 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 RAPGEF1Q13905 1077 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 PKDCCQ504Y2 493 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 C10orf120Q5SQS8 335 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 BTBD8Q5XKL5 378 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 CWF19L1Q69YN2 538 aaKnown RBP24.04■■□□□ 1.44
CDKN3-208ENST00000555837 GPRIN1Q7Z2K8 1008 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 TFAP2BQ92481 460 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 STK33Q9BYT3 514 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.04■■□□□ 1.44
CDKN3-208ENST00000555837 ZNF510Q9Y2H8 683 aa24.04■■□□□ 1.44
CDKN3-208ENST00000555837 A0A1W2PQH9 124 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 UCHL3P15374 230 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 YWHAGP61981 247 aaKnown RBP eCLIP24.03■■□□□ 1.44
CDKN3-208ENST00000555837 PREPLQ4J6C6 727 aaPredicted RBP24.03■■□□□ 1.44
CDKN3-208ENST00000555837 RNF139Q8WU17 664 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 SECISBP2LQ93073 1101 aaKnown RBP24.03■■□□□ 1.44
CDKN3-208ENST00000555837 LRRC3BQ96PB8 259 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 LSM14BQ9BX40 385 aaKnown RBP24.03■■□□□ 1.44
CDKN3-208ENST00000555837 PDCL3Q9H2J4 239 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 CCSER2Q9H7U1 834 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 ABCC13Q9NSE7 274 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 CFAP97Q9P2B7 532 aa24.03■■□□□ 1.44
CDKN3-208ENST00000555837 SYCE3A1L190 88 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 LGALS16A8MUM7 142 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 SPECC1L-ADORA2AF8WAN1 911 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 ZNF18P17022 549 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 RPS9P46781 194 aaKnown RBP24.02■■□□□ 1.44
CDKN3-208ENST00000555837 UBXN1Q04323 297 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 ADIGQ0VDE8 80 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 PPP2R5DQ14738 602 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 DGKKQ5KSL6 1271 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 NEK11Q8NG66 645 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 ZFYVE19Q96K21 471 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 DCLK3Q9C098 648 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 EBF3Q9H4W6 596 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 SIX2Q9NPC8 291 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 SMPD4Q9NXE4 827 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 GTSE1Q9NYZ3 720 aa24.02■■□□□ 1.44
CDKN3-208ENST00000555837 GOLGA6L19H0YKK7 550 aa24.01■■□□□ 1.43
CDKN3-208ENST00000555837 ADH1CP00326 375 aa24.01■■□□□ 1.43
CDKN3-208ENST00000555837 CCDC172P0C7W6 258 aa24.01■■□□□ 1.43
CDKN3-208ENST00000555837 CTHP32929 405 aa24.01■■□□□ 1.43
CDKN3-208ENST00000555837 PTPN5P54829 565 aa24.01■■□□□ 1.43
CDKN3-208ENST00000555837 KCNMA1Q12791 1236 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms