RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TBC1D14Q9P2M4 693 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 NCDNQ9UBB6 729 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 SMG5Q9UPR3 1016 aaKnown RBP19.42■□□□□ 0.7
NEDD1-208ENST00000555806 FAM186AA6NE01 2351 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 RIF1Q5UIP0 2472 aaKnown RBP19.41■□□□□ 0.7
NEDD1-208ENST00000555806 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 E2F8A0AVK6 867 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 TBXAS1P24557 533 aaPredicted RBP19.41■□□□□ 0.7
NEDD1-208ENST00000555806 KIF11P52732 1056 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 SLC8A3P57103 927 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 DMWDQ09019 674 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 CETN1Q12798 172 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 ARHGAP17Q68EM7 881 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 FOXR2Q6PJQ5 311 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 TRIML1Q8N9V2 468 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 RUBCNQ92622 972 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 NT5C1BQ96P26 610 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 EPC1Q9H2F5 836 aa19.41■□□□□ 0.7
NEDD1-208ENST00000555806 GNA14O95837 355 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 TBX18O95935 607 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 ADH1CP00326 375 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 CD19P15391 556 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 ATP5C1P36542 298 aaKnown RBP19.4■□□□□ 0.7
NEDD1-208ENST00000555806 OPRD1P41143 372 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 SGO2Q562F6 1265 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 LONP2Q86WA8 852 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 ADGRG2Q8IZP9 1017 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 RPLP0P6Q8NHW5 317 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 NMUR1Q9HB89 426 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 CYLDQ9NQC7 956 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 KIAA1468Q9P260 1216 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 RAB23Q9ULC3 237 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 SLC8A2Q9UPR5 921 aa19.4■□□□□ 0.7
NEDD1-208ENST00000555806 PTPRZ1P23471 2315 aaPredicted RBP19.4■□□□□ 0.7
NEDD1-208ENST00000555806 ADH5P11766 374 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 RARGP13631 454 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 GOLGA8FQ08AF8 430 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 GOLGA8DPQ0D2H9 430 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 GOLGA7BQ2TAP0 167 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 PRR23BQ6ZRT6 265 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 CCDC186Q7Z3E2 898 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 BBS7Q8IWZ6 715 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 DCLK2Q8N568 766 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 EZH1Q92800 747 aaPredicted RBP19.39■□□□□ 0.69
NEDD1-208ENST00000555806 SECISBP2LQ93073 1101 aaKnown RBP19.39■□□□□ 0.69
NEDD1-208ENST00000555806 OTUB2Q96DC9 234 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 SRRTQ9BXP5 876 aaKnown RBP19.39■□□□□ 0.69
NEDD1-208ENST00000555806 OSER1Q9NX31 292 aa19.39■□□□□ 0.69
NEDD1-208ENST00000555806 PMM2O15305 246 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 P4HA2O15460 535 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 FGFR1OPO95684 399 aaKnown RBP19.38■□□□□ 0.69
NEDD1-208ENST00000555806 HOXC13P31276 330 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 PSEN1P49768 467 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 SEC13P55735 322 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 LPAL2Q16609 132 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 GAB4Q2WGN9 574 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 C10orf120Q5SQS8 335 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 LY6G5CQ5SRR4 150 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 RHBDF2Q6PJF5 856 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 PIGZQ86VD9 579 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 PPM1KQ8N3J5 372 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 ANKRD52Q8NB46 1076 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 WBP2Q969T9 261 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 ACDQ96AP0 544 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.38■□□□□ 0.69
NEDD1-208ENST00000555806 HESX1Q9UBX0 185 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 LSM7Q9UK45 103 aaKnown RBP19.38■□□□□ 0.69
NEDD1-208ENST00000555806 NUDT5Q9UKK9 219 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 TSPAN16Q9UKR8 245 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 PCDHB4Q9Y5E5 795 aa19.38■□□□□ 0.69
NEDD1-208ENST00000555806 ATG2BQ96BY7 2078 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 MDM4O15151 490 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 CCDC192P0DO97 292 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 RALAP11233 206 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 SLC6A11P48066 632 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 PXNP49023 591 aaPredicted RBP19.37■□□□□ 0.69
NEDD1-208ENST00000555806 BCAT1P54687 386 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 GAD2Q05329 585 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 KCNH2Q12809 1159 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 SIM2Q14190 667 aaPredicted RBP19.37■□□□□ 0.69
NEDD1-208ENST00000555806 TMEM270Q6UE05 265 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 TADA2BQ86TJ2 420 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 TTC30AQ86WT1 665 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 KIAA2013Q8IYS2 634 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 UBR7Q8N806 425 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 CCDC26Q8TAB7 109 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 PNKPQ96T60 521 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 KLF16Q9BXK1 252 aaPredicted RBP19.37■□□□□ 0.69
NEDD1-208ENST00000555806 POLR3BQ9NW08 1133 aaPredicted RBP19.37■□□□□ 0.69
NEDD1-208ENST00000555806 DNMT3LQ9UJW3 386 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 GMEB2Q9UKD1 530 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.37■□□□□ 0.69
NEDD1-208ENST00000555806 USP3Q9Y6I4 520 aa19.37■□□□□ 0.69
NEDD1-208ENST00000555806 AFPP02771 609 aaKnown RBP19.36■□□□□ 0.69
NEDD1-208ENST00000555806 APODP05090 189 aa19.36■□□□□ 0.69
NEDD1-208ENST00000555806 VDRP11473 427 aa19.36■□□□□ 0.69
NEDD1-208ENST00000555806 HOXA6P31267 233 aa19.36■□□□□ 0.69
NEDD1-208ENST00000555806 CNR2P34972 360 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms