RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PDGFRLQ15198 375 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 TPD52L1Q16890 204 aaPredicted RBP14.41□□□□□ -0.1
SNX6-203ENST00000555416 GAB4Q2WGN9 574 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 LCLAT1Q6UWP7 414 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 Q6ZS52 159 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 BHLHA9Q7RTU4 235 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 RALGPS2Q86X27 583 aaPredicted RBP14.41□□□□□ -0.1
SNX6-203ENST00000555416 C1orf210Q8IVY1 113 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 NELL2Q99435 816 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 ECT2Q9H8V3 914 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 LMAN1LQ9HAT1 526 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 ACP6Q9NPH0 428 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 C2orf42Q9NWW7 574 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 CNTN6Q9UQ52 1028 aa14.41□□□□□ -0.1
SNX6-203ENST00000555416 MRPS17Q9Y2R5 130 aaKnown RBP14.41□□□□□ -0.1
SNX6-203ENST00000555416 ANTXRLA6NF34 631 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 BECN2A8MW95 431 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 XPO1O14980 1071 aaKnown RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 GREM1O60565 184 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 PAEPP09466 180 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 IRF1P10914 325 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 GJA4P35212 333 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 RPS9P46781 194 aaKnown RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 IFNAR2P48551 515 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 TUBP50607 506 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 PDE6CP51160 858 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 BCAT1P54687 386 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 MTAPQ13126 283 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 MAN2A1Q16706 1144 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 FSTL4Q6MZW2 842 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 CCDC186Q7Z3E2 898 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 EZH1Q92800 747 aaPredicted RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 ATOH1Q92858 354 aaPredicted RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 TUBGCP2Q9BSJ2 902 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 KLF16Q9BXK1 252 aaPredicted RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 UBXN6Q9BZV1 441 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 CHRDQ9H2X0 955 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 CYLDQ9NQC7 956 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 TLR8Q9NR97 1041 aaKnown RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNX6-203ENST00000555416 SPATA6Q9NWH7 488 aaPredicted RBP14.4□□□□□ -0.1
SNX6-203ENST00000555416 DACH1Q9UI36 760 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNX6-203ENST00000555416 NFE2L3Q9Y4A8 694 aa14.4□□□□□ -0.1
SNX6-203ENST00000555416 KCNJ18B7U540 433 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 PIK3R2O00459 728 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 CYP17A1P05093 508 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 RARGP13631 454 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 KRT5P13647 590 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 RGS7P49802 495 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 TKTL1P51854 596 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 BST2Q10589 180 aaKnown RBP14.39□□□□□ -0.11
SNX6-203ENST00000555416 KCNMA1Q12791 1236 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 KCNJ12Q14500 433 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 CNGA2Q16280 664 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 EXOC3L4Q17RC7 722 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 VWA3BQ502W6 1294 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 PKN3Q6P5Z2 889 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 GBP6Q6ZN66 633 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
SNX6-203ENST00000555416 SLC35F5Q8WV83 523 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 SECISBP2LQ93073 1101 aaKnown RBP14.39□□□□□ -0.11
SNX6-203ENST00000555416 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 DNAI2Q9GZS0 605 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 NDST4Q9H3R1 872 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 NAGPAQ9UK23 515 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 KIAA1257Q9ULG3 409 aa14.39□□□□□ -0.11
SNX6-203ENST00000555416 MYOFQ9NZM1 2061 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 GTPBP10A4D1E9 387 aaKnown RBP14.38□□□□□ -0.11
SNX6-203ENST00000555416 MBD3O95983 291 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 SP9P0CG40 484 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
SNX6-203ENST00000555416 PRKCSHP14314 528 aaPredicted RBP14.38□□□□□ -0.11
SNX6-203ENST00000555416 PLA2G4AP47712 749 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 GALK1P51570 392 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 ADIGQ0VDE8 80 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 CCINQ13939 588 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 ARHGAP44Q17R89 818 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 TCP11X2Q5H9J9 407 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 TMEM196Q5HYL7 178 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
SNX6-203ENST00000555416 CDKAL1Q5VV42 579 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 PM20D1Q6GTS8 502 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 PMF1Q6P1K2 205 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 DENND1BQ6P3S1 775 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 RHBDF2Q6PJF5 856 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 TSSK4Q6SA08 328 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 SFTPA1Q8IWL2 248 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 ATP2A3Q93084 1043 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 MSANTD3Q96H12 275 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 HESX1Q9UBX0 185 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 APEX2Q9UBZ4 518 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 MYO15AQ9UKN7 3530 aa14.38□□□□□ -0.11
SNX6-203ENST00000555416 E2F8A0AVK6 867 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms