RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 C2orf40Q9H1Z8 148 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 STN1Q9H668 368 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 FBXO6Q9NRD1 293 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 A0A1B0GVG6 124 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 FARP2O94887 1054 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 CALCAP01258 141 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 PYGLP06737 847 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 UQCRBP14927 111 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 STIP1P31948 543 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 MAGEA8P43361 318 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 CAPSQ13938 189 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 LBX2Q6XYB7 198 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 ZBTB8OSQ8IWT0 167 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 TMEM35BQ8NCS4 154 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 FAM172AQ8WUF8 416 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 ZNF606Q8WXB4 792 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 SEPT1Q8WYJ6 367 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 HIC2Q96JB3 615 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 NMUR2Q9GZQ4 415 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 SLC17A7Q9P2U7 560 aa11.13□□□□□ -0.63
MTHFD1-210ENST00000555252 TMEM191CA6NGB0 347 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 H3BRJ5 948 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 OGTO15294 1046 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PEX1O43933 1283 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SERPINA6P08185 405 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 ZCCHC18P0CG32 403 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 TFDP1Q14186 410 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 MXD4Q14582 209 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 TFDP3Q5H9I0 405 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SPOCD1Q6ZMY3 1216 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 C3orf62Q6ZUJ4 267 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SH2D5Q6ZV89 423 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 DHDDSQ86SQ9 333 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PASD1Q8IV76 773 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 NAT8LQ8N9F0 302 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 OR5B17Q8NGF7 314 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SLC35B2Q8TB61 432 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 GFM2Q969S9 779 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PCYT2Q99447 389 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PLK2Q9NYY3 685 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PPP1R1BQ9UD71 204 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 IKBKGQ9Y6K9 419 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 BRCA1P38398 1863 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 hCG_1818297A0A087WSY0 165 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 STRNO43815 780 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 ASLP04424 464 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 VAV1P15498 845 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 CD58P19256 250 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 CDH5P33151 784 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PIGHQ14442 188 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 C1orf146Q5VVC0 180 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 DNAJC24Q6P3W2 148 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SPATA24Q86W54 205 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PALM2Q8IXS6 379 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PDIK1LQ8N165 341 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 GLIS1Q8NBF1 620 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SLC44A1Q8WWI5 657 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 S100A14Q9HCY8 104 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 PNPLA8Q9NP80 782 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SLC7A8Q9UHI5 535 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 USTQ9Y2C2 406 aa11.12□□□□□ -0.63
MTHFD1-210ENST00000555252 UTRNP46939 3433 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 CCNT2O60583 730 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 MSCO60682 206 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 RNASEH1O60930 286 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 KRT1P04264 644 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 AOC1P19801 751 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 EIF4BP23588 611 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 TRPC3Q13507 836 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 HIC1Q14526 733 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 KLC3Q6P597 504 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 NIPA2Q8N8Q9 360 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 PRPF31Q8WWY3 499 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 LENG1Q96BZ8 264 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 CCDC106Q9BWC9 280 aa11.11□□□□□ -0.63
MTHFD1-210ENST00000555252 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms