RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 EYSQ5T1H1 3165 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 SOBPA7XYQ1 873 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TNFRSF10BO14763 440 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 SART1O43290 800 aaKnown RBP11.47□□□□□ -0.57
SHMT2-218ENST00000555213 CEBPBP17676 345 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TNFAIP3P21580 790 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 SP100P23497 879 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-218ENST00000555213 ACADSBP45954 432 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TKTL1P51854 596 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 USP46P62068 366 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 CDR2Q01850 454 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TAF10Q12962 218 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TEAD2Q15562 447 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 CCDC122Q5T0U0 273 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 DENND1BQ6P3S1 775 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 ALKBH5Q6P6C2 394 aaKnown RBP11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TRIM72Q6ZMU5 477 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 GAREM2Q75VX8 874 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 PASD1Q8IV76 773 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TMEM35BQ8NCS4 154 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 ITFG1Q8TB96 612 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 FEZF2Q8TBJ5 459 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 STK32AQ8WU08 396 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 KCTD13Q8WZ19 329 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 GOLGA1Q92805 767 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 FGF13Q92913 245 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 HSFY1Q96LI6 401 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.47□□□□□ -0.57
SHMT2-218ENST00000555213 LRRC3Q9BY71 257 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 MIS12Q9H081 205 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 ISCUQ9H1K1 167 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 LHX5Q9H2C1 402 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 SYNCQ9H7C4 482 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 LZTFL1Q9NQ48 299 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TLR8Q9NR97 1041 aaKnown RBP11.47□□□□□ -0.57
SHMT2-218ENST00000555213 ST7Q9NRC1 585 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 SCML2Q9UQR0 700 aa11.47□□□□□ -0.57
SHMT2-218ENST00000555213 TRAV19A0A0A6YYK7 116 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CCP110O43303 1012 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 FBXO21O94952 628 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 ZBED1O96006 694 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CYP1A1P04798 512 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-218ENST00000555213 UNGP13051 313 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-218ENST00000555213 BMP1P13497 986 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 PFKLP17858 780 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 SSTR3P32745 418 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-218ENST00000555213 AVPR1AP37288 418 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CCR2P41597 374 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 PSEN1P49768 467 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 ETF1P62495 437 aaKnown RBP11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CYP4F8P98187 520 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 ZP2Q05996 745 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 ADIGQ0VDE8 80 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 PDCLQ13371 301 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 SPA17Q15506 151 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 GPR158Q5T848 1215 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 MTSS1LQ765P7 747 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 GPRIN1Q7Z2K8 1008 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 TADA2BQ86TJ2 420 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 VPS36Q86VN1 386 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 ZDHHC14Q8IZN3 488 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 WDTC1Q8N5D0 677 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 SCAMP5Q8TAC9 235 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 ADAMTS19Q8TE59 1207 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 SLC35F5Q8WV83 523 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 TCEAL4Q96EI5 215 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CDK5RAP1Q96SZ6 601 aaKnown RBP11.46□□□□□ -0.57
SHMT2-218ENST00000555213 TRIM62Q9BVG3 475 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 NACA2Q9H009 215 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 TASP1Q9H6P5 420 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 IL21Q9HBE4 155 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 TRPC7Q9HCX4 862 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 CNGB3Q9NQW8 809 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 SEPT11Q9NVA2 429 aaKnown RBP11.46□□□□□ -0.57
SHMT2-218ENST00000555213 IL37Q9NZH6 218 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 GMIPQ9P107 970 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 EPS15L1Q9UBC2 864 aa11.46□□□□□ -0.57
SHMT2-218ENST00000555213 DENND4AQ7Z401 1863 aa11.46□□□□□ -0.58
SHMT2-218ENST00000555213 C2orf16Q68DN1 1984 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 FAM92AA1XBS5 289 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 ZNF840PA6NDX5 716 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 C2CD4DB7Z1M9 353 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 F11P03951 625 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 GZMAP12544 262 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 LAMP2P13473 410 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 LCP1P13796 627 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 TNNT1P13805 278 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 GJA1P17302 382 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 GPD2P43304 727 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 RGS7P49802 495 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 TUBP50607 506 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 GALCP54803 685 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 RAB41Q5JT25 222 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 PPP1R2P3Q6NXS1 205 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms