RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 BMP8AQ7Z5Y6 402 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 CCSER2Q9H7U1 834 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 BRD9Q9H8M2 597 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.96□□□□□ -0.01
SHMT2-217ENST00000555116 FBXL21Q9UKT6 434 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 MYOFQ9NZM1 2061 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 A0A1W2PQH9 124 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ZNF263O14978 683 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 CHADO15335 359 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 COCHO43405 550 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 MED7O43513 233 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 PDGFBP01127 241 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 PTMAP06454 111 aaKnown RBP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 GPD2P43304 727 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 TKTL1P51854 596 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 POLR2FP61218 127 aaKnown RBP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 PFKPQ01813 784 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 PTK2Q05397 1052 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ZNF77Q15935 545 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 BHLHA9Q7RTU4 235 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 SLC47A2Q86VL8 602 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 YAF2Q8IY57 180 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 DNASE1L2Q92874 299 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 LRFN3Q9BTN0 628 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ULBP1Q9BZM6 244 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 LRRC4Q9HBW1 653 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 TRPV5Q9NQA5 729 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 CYLDQ9NQC7 956 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 CA14Q9ULX7 337 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 DAAM1Q9Y4D1 1078 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 KMT2EQ8IZD2 1858 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 MIA3Q5JRA6 1907 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 A0A1B0GTH6 734 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 PRR33A8MZF0 331 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 F8VZ95 297 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 RPL34P49207 117 aaKnown RBP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 RGS7P49802 495 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 JAM2P57087 298 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ADIGQ0VDE8 80 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 HFE2Q6ZVN8 426 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 SIX5Q8N196 739 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 SH3RF2Q8TEC5 729 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 NDRG1Q92597 394 aaKnown RBP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 IRF7Q92985 503 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ZFYVE19Q96K21 471 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHMT2-217ENST00000555116 PCDHGC3Q9UN70 934 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 ZKSCAN5Q9Y2L8 839 aa14.95□□□□□ -0.02
SHMT2-217ENST00000555116 TLR5O60602 858 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 ZBED1O96006 694 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 MBL2P11226 248 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-217ENST00000555116 MSNP26038 577 aaKnown RBP14.94□□□□□ -0.02
SHMT2-217ENST00000555116 PSEN1P49768 467 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 SLC44A4Q53GD3 710 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 SCML4Q8N228 414 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 ZNF276Q8N554 614 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 NEK11Q8NG66 645 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 ZFRQ96KR1 1074 aaKnown RBP14.94□□□□□ -0.02
SHMT2-217ENST00000555116 HSFY1Q96LI6 401 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 PCMTD1Q96MG8 357 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-217ENST00000555116 NLRC4Q9NPP4 1024 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 ARHGEF3Q9NR81 526 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 CLIC5Q9NZA1 410 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 CYTH4Q9UIA0 394 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 CPQQ9Y646 472 aa14.94□□□□□ -0.02
SHMT2-217ENST00000555116 LEFTY2O00292 366 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 RARGP13631 454 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 BPIFB4P59827 614 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 MTF1Q14872 753 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 FILIP1LQ4L180 1135 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 WDTC1Q8N5D0 677 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 PBXIP1Q96AQ6 731 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 FAM83CQ9BQN1 747 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 CNGB3Q9NQW8 809 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 GKN1Q9NS71 199 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 THG1LQ9NWX6 298 aaKnown RBP14.93□□□□□ -0.02
SHMT2-217ENST00000555116 SMPD4Q9NXE4 827 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 NAGPAQ9UK23 515 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 TBX18O95935 607 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 LCP1P13796 627 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 CYP11B1P15538 503 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 TPM4P67936 248 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 FANCCQ00597 558 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 MLF2Q15773 248 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-217ENST00000555116 KLHDC10Q6PID8 442 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 SIX6OS1Q8N1H7 587 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 ARHGAP18Q8N392 663 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 STK32AQ8WU08 396 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 SLC4A5Q9BY07 1137 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 HEBP1Q9NRV9 189 aa14.93□□□□□ -0.02
SHMT2-217ENST00000555116 SHISA7A6NL88 538 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 GOLGA6L19H0YKK7 550 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 PIK3R2O00459 728 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 SERPINC1P01008 464 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 SOX5P35711 763 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 STARD6P59095 220 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 DAOAP59103 153 aa14.92□□□□□ -0.02
SHMT2-217ENST00000555116 YWHAGP61981 247 aaKnown RBP eCLIP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms