RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 CHST2Q9Y4C5 530 aa6.17□□□□□ -1.42
PSEN1-211ENST00000554995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.17□□□□□ -1.42
PSEN1-211ENST00000554995 SNX14Q9Y5W7 946 aa6.17□□□□□ -1.42
PSEN1-211ENST00000554995 NCANO14594 1321 aa6.17□□□□□ -1.42
PSEN1-211ENST00000554995 DYTNA2CJ06 578 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 NPEPPSL1A6NEC2 478 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 KIF28PB7ZC32 967 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 CER1O95813 267 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 HSP90AA1P07900 732 aaKnown RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 CNPP09543 421 aaKnown RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 SERPINA4P29622 427 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 RPS7P62081 194 aaKnown RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 IRX6P78412 446 aaPredicted RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 FPGSQ05932 587 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 TUBB3Q13509 450 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 GALNTL6Q49A17 601 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 L1TD1Q5T7N2 865 aaKnown RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 DEPDC1Q5TB30 811 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 ICE2Q659A1 982 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 CLEC9AQ6UXN8 241 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 Q6ZRM9 215 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 MICALCLQ6ZW33 695 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 SYT13Q7L8C5 426 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 SGMS1Q86VZ5 419 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 ABRAQ8N0Z2 381 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 FSTL5Q8N475 847 aaPredicted RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 TMEM125Q96AQ2 219 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 TTPALQ9BTX7 342 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 NOD2Q9HC29 1040 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 BLOC1S4Q9NUP1 217 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 NDUFAF4Q9P032 175 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 KCND3Q9UK17 655 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 RIMKLBQ9ULI2 386 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 DERAQ9Y315 318 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 RRP7AQ9Y3A4 280 aaKnown RBP6.16□□□□□ -1.42
PSEN1-211ENST00000554995 RPS6KL1Q9Y6S9 549 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 ZNF536O15090 1300 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 COL15A1P39059 1388 aa6.16□□□□□ -1.42
PSEN1-211ENST00000554995 CCDC196A0A1B0GTZ2 297 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 TRIAP1O43715 76 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 CBFA2T3O75081 653 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 RPS6KA4O75676 772 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 EPHA3P29320 983 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 CNR2P34972 360 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 MAN2A2P49641 1150 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 ADAM17P78536 824 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 GEN1Q17RS7 908 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 B3GNTL1Q67FW5 361 aaPredicted RBP6.15□□□□□ -1.42
PSEN1-211ENST00000554995 MSANTD2Q6P1R3 559 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 CFAP161Q6P656 301 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 DSTYKQ6XUX3 929 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 GDF7Q7Z4P5 450 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 TRABD2AQ86V40 505 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 ZNF808Q8N4W9 903 aaPredicted RBP6.15□□□□□ -1.42
PSEN1-211ENST00000554995 OSCP1Q8WVF1 389 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 HMGB4Q8WW32 186 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 ATRIPQ8WXE1 791 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 ZBTB10Q96DT7 871 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 HAPLN3Q96S86 360 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 OSBPL9Q96SU4 736 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 C17orf80Q9BSJ5 609 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 AGXT2Q9BYV1 514 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 GPR63Q9BZJ6 419 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 IRAK4Q9NWZ3 460 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 PI4KBQ9UBF8 816 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 NRBP1Q9UHY1 535 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 SLC27A6Q9Y2P4 619 aa6.15□□□□□ -1.42
PSEN1-211ENST00000554995 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 TFRCP02786 760 aaKnown RBP6.14□□□□□ -1.43
PSEN1-211ENST00000554995 ZSCAN22P10073 491 aaPredicted RBP6.14□□□□□ -1.43
PSEN1-211ENST00000554995 MAGEA10P43363 369 aaPredicted RBP6.14□□□□□ -1.43
PSEN1-211ENST00000554995 CDK7P50613 346 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 SCNN1GP51170 649 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 RBM5P52756 815 aaKnown RBP eCLIP6.14□□□□□ -1.43
PSEN1-211ENST00000554995 CXADRP78310 365 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 SP2Q02086 613 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 SF3A3Q12874 501 aaKnown RBP eCLIP6.14□□□□□ -1.43
PSEN1-211ENST00000554995 KCTD2Q14681 263 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 ACOX1Q15067 660 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 NBPF8Q3BBV2 869 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 GPATCH4Q5T3I0 446 aaKnown RBP6.14□□□□□ -1.43
PSEN1-211ENST00000554995 TMEM132CQ8N3T6 1108 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 TCP11L2Q8N4U5 519 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 TSPYL6Q8N831 410 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 C11orf44Q8N8P7 122 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 ATG4AQ8WYN0 398 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 MCRS1Q96EZ8 462 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 REEP2Q9BRK0 252 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 MECRQ9BV79 373 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 VN1R3Q9BXE9 311 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 PREBQ9HCU5 417 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 TRPM5Q9NZQ8 1165 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 NFU1Q9UMS0 254 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 ARHGAP26Q9UNA1 814 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 DNAJC16Q9Y2G8 782 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 FPGT-TNNI3KV9GXZ4 949 aa6.14□□□□□ -1.43
PSEN1-211ENST00000554995 FAM90A20PA6NIJ5 464 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 AHRRA9YTQ3 701 aa6.13□□□□□ -1.43
PSEN1-211ENST00000554995 PRRG2O14669 202 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms