RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MYH9P35579 1960 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 UNC80Q8N2C7 3258 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 FAM86B1E9PN63 330 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 MATN2O00339 956 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 MAFGO15525 162 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ARHGAP6O43182 974 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CAND2O75155 1236 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PARNO95453 639 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CCNE2O96020 404 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CYP3A4P08684 503 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 FAM86B2P0C5J1 330 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ATP2A2P16615 1042 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CR2P20023 1033 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PTX3P26022 381 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 MARK3P27448 753 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 APEX1P27695 318 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CIITAP33076 1130 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 FLT3P36888 993 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ANAPC15P60006 121 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ACTR2P61160 394 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CCT2P78371 535 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 DEFB103AP81534 67 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 SETQ01105 290 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ALDH6A1Q02252 535 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 MGAT3Q09327 533 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ST3GAL1Q11201 340 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PPFIA1Q13136 1202 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 EIF4HQ15056 248 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 NPY5RQ15761 445 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CEP55Q53EZ4 464 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 HS1BP3Q53T59 392 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PRAMEF9Q5VWM5 478 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CDCA2Q69YH5 1023 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 TMEM200BQ69YZ2 307 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CC2D1AQ6P1N0 951 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 USP30Q70CQ3 517 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 UBE2R2Q712K3 238 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 RPAINQ86UA6 219 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 HERC6Q8IVU3 1022 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 KIAA1958Q8N8K9 716 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 USP38Q8NB14 1042 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CCDC148Q8NFR7 591 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PHOSPHO2Q8TCD6 241 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CCDC12Q8WUD4 166 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 SEPT1Q8WYJ6 367 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ATP6V0A1Q93050 837 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 LENG9Q96B70 501 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 FOXRED1Q96CU9 486 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF274Q96GC6 653 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 TMEM176AQ96HP8 235 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 AIFM3Q96NN9 605 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 ADOQ96SZ5 270 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CDK5RAP1Q96SZ6 601 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 SDF4Q9BRK5 362 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 FTOQ9C0B1 505 aaKnown RBP eCLIP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 GLT8D2Q9H1C3 349 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 RNPEPQ9H4A4 650 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 C6orf50Q9HD87 102 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PDRG1Q9NUG6 133 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 SETD4Q9NVD3 440 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 SLC9A2Q9UBY0 812 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 TSC22D4Q9Y3Q8 395 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 CYP46A1Q9Y6A2 500 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 COL4A6Q14031 1691 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 PRRC2BQ5JSZ5 2229 aaKnown RBP4.69□□□□□ -1.66
VTI1B-203ENST00000554636 NRCAMQ92823 1304 aa4.69□□□□□ -1.66
VTI1B-203ENST00000554636 BRWD1Q9NSI6 2320 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 LOXHD1Q8IVV2 1947 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 IGKV6D-21A0A0A0MT36 114 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 UBA6A0AVT1 1052 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 LCHNA4D1U4 455 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 MBLAC1A4D2B0 266 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 EPOPA6NHQ4 379 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 RSPH10B2B2RC85 870 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 DDX39AO00148 427 aaKnown RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 PFKFB2O60825 505 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 APOL3O95236 402 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 DEXIO95424 95 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 LARGE1O95461 756 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 CTDNEP1O95476 244 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 CHRNA1P02708 482 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 CENPBP07199 599 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 CA3P07451 260 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 RSPH10BP0C881 870 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ACTN1P12814 892 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 FOSL2P15408 326 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 SLC9A1P19634 815 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 GNA11P29992 359 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 THPOP40225 353 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 NEK4P51957 841 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 AK2P54819 239 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 AKAP17AQ02040 695 aaKnown RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 STK3Q13188 491 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ADAM15Q13444 863 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ACAP1Q15027 740 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 PLCB4Q15147 1175 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF174Q15697 407 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ARHGAP44Q17R89 818 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 PLEKHG4Q58EX7 1191 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms