RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 RARGP13631 454 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-213ENST00000554600 TCF3P15923 654 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 GJA4P35212 333 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 ATP5C1P36542 298 aaKnown RBP11.23□□□□□ -0.61
SHMT2-213ENST00000554600 PGFP49763 221 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 TUBP50607 506 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 KIF11P52732 1056 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 ZXDBP98169 803 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 PDE4CQ08493 712 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
SHMT2-213ENST00000554600 FZD5Q13467 585 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 PPP2R5DQ14738 602 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 ZC3H14Q6PJT7 736 aaKnown RBP11.23□□□□□ -0.61
SHMT2-213ENST00000554600 TSSK4Q6SA08 328 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 GBP6Q6ZN66 633 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 UBR7Q8N806 425 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 ANKRD52Q8NB46 1076 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-213ENST00000554600 LMO3Q8TAP4 145 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 UBA3Q8TBC4 463 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 MED15Q96RN5 788 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 P2RY13Q9BPV8 354 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 LRRC4Q9HBW1 653 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 UBE2TQ9NPD8 197 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-213ENST00000554600 NUDT5Q9UKK9 219 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 MDM4O15151 490 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 CALCAP01258 141 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 PAEPP09466 180 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 RALAP11233 206 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
SHMT2-213ENST00000554600 ERCC5P28715 1186 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-213ENST00000554600 USP8P40818 1118 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 NBL1P41271 181 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 PSEN1P49768 467 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 GALK1P51570 392 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 CCR3P51677 355 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 TKTL1P51854 596 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 GCNT1Q02742 428 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 ARHGAP44Q17R89 818 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 SNX30Q5VWJ9 437 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 Q6ZS52 159 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 RSRC2Q7L4I2 434 aaKnown RBP11.22□□□□□ -0.61
SHMT2-213ENST00000554600 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 SIX6OS1Q8N1H7 587 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 CD101Q93033 1021 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 NKD2Q969F2 451 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-213ENST00000554600 CHFRQ96EP1 664 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 IER2Q9BTL4 223 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 THAP9Q9H5L6 903 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 NMUR1Q9HB89 426 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 TBC1D14Q9P2M4 693 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 LSM7Q9UK45 103 aaKnown RBP11.22□□□□□ -0.61
SHMT2-213ENST00000554600 FBXO4Q9UKT5 387 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 KIAA1257Q9ULG3 409 aa11.22□□□□□ -0.61
SHMT2-213ENST00000554600 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 THADAQ6YHU6 1953 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 E2F8A0AVK6 867 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 M0QYV0 167 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-213ENST00000554600 TULP2O00295 520 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 O00370 1275 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 TRDMT1O14717 391 aaKnown RBP11.21□□□□□ -0.61
SHMT2-213ENST00000554600 XPO1O14980 1071 aaKnown RBP11.21□□□□□ -0.61
SHMT2-213ENST00000554600 GFRA3O60609 400 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 ADH1CP00326 375 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 EGFP01133 1207 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 CYP17A1P05093 508 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 SETSIPP0DME0 302 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 LCP1P13796 627 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 CXCL12P48061 93 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 RGS7P49802 495 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 ADIGQ0VDE8 80 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 EFEMP1Q12805 493 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 DHCR24Q15392 516 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 MAN2A1Q16706 1144 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 EXOC3L4Q17RC7 722 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 TMEM196Q5HYL7 178 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-213ENST00000554600 FSTL4Q6MZW2 842 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 GJB7Q6PEY0 223 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 CCDC186Q7Z3E2 898 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 TADA2BQ86TJ2 420 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 MIB1Q86YT6 1006 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 MAML2Q8IZL2 1156 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-213ENST00000554600 ARHGAP18Q8N392 663 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 TFAP2BQ92481 460 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 KREMEN1Q96MU8 473 aa11.21□□□□□ -0.61
SHMT2-213ENST00000554600 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms