RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CLNS1AP54105 237 aaKnown RBP16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 RGS9BPQ6ZS82 235 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 PLD5Q8N7P1 536 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 NETO2Q8NC67 525 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 ACAP3Q96P50 834 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 RNF157Q96PX1 679 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 MRPL45Q9BRJ2 306 aaKnown RBP16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 MAF1Q9H063 256 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 NOP53Q9NZM5 478 aaKnown RBP16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 BRCA1P38398 1863 aaKnown RBP16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.21
ARHGEF40-203ENST00000554514 IQANK1A0A1B0GTG1 560 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 H0Y3Z8 333 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 T-ENOLP0DO92 83 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 CYP2C8P10632 490 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC18A1P54219 525 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 TNFAIP2Q03169 654 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 BMPR2Q13873 1038 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 TFDP2Q14188 446 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 AFG1LQ8WV93 481 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 DHRS4Q9BTZ2 278 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 TSSK1BQ9BXA7 367 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 YY1AP1Q9H869 796 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 PPCSQ9HAB8 311 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 MAD1L1Q9Y6D9 718 aa16.33■□□□□ 0.2
ARHGEF40-203ENST00000554514 CFAP69A5D8W1 941 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 CXorf49A8MYA2 514 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 APOL1O14791 398 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 UGT1A9O60656 530 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 PFKMP08237 780 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 ALADP13716 330 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 CCND1P24385 295 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 PCK1P35558 622 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 KCNJ11Q14654 390 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 ARMCX2Q7L311 632 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 PRR11Q96HE9 360 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 APOL6Q9BWW8 343 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC13A1Q9BZW2 595 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 IQCGQ9H095 443 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 UGT1A7Q9HAW7 530 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 UGT1A10Q9HAW8 530 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 UGT1A8Q9HAW9 530 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 HES2Q9Y543 173 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 CCDC195A0A1B0GUA6 201 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 EIF4E1BA6NMX2 242 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 TRIM49D1C9J1S8 452 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 STIP1P31948 543 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 RBP5P82980 135 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZBTB16Q05516 673 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 NAA25Q14CX7 972 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 MECRQ9BV79 373 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 SNRNP25Q9BV90 132 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 TBC1D10AQ9BXI6 508 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 CYP3A43Q9HB55 503 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 FBXO6Q9NRD1 293 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 NKX1-2Q9UD57 310 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 A0A1B0GUA9 196 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 SDC4P31431 198 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 ATICP31939 592 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 SKIV2L2P42285 1042 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC26A2P50443 739 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 YWHAZP63104 245 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 TTC30AQ86WT1 665 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 MAP7D3Q8IWC1 876 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 LRMDAQ9H2I8 198 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 USP29Q9HBJ7 922 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 HEY2Q9UBP5 337 aa16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZC3H7BQ9UGR2 993 aaKnown RBP16.32■□□□□ 0.2
ARHGEF40-203ENST00000554514 IL4RP24394 825 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 KIZQ2M2Z5 673 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 PCDH19Q8TAB3 1148 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC7A6OSQ96CW6 309 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 RSRC1Q96IZ7 334 aaKnown RBP16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 ASB7Q9H672 318 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 EBF2Q9HAK2 575 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 PIH1D1Q9NWS0 290 aaKnown RBP16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 KANSL3Q9P2N6 904 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 TRIP11Q15643 1979 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 TM9SF1O15321 606 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 PDGFRBP09619 1106 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 ARHGAP1Q07960 439 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 RASA2Q15283 850 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 LCLAT1Q6UWP7 414 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 CDHR3Q6ZTQ4 885 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZNF276Q8N554 614 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 OR6B3Q8NGW1 331 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC44A1Q8WWI5 657 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 TRIM55Q9BYV6 548 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 DHX35Q9H5Z1 703 aaKnown RBP16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 PCDH18Q9HCL0 1135 aa16.31■□□□□ 0.2
ARHGEF40-203ENST00000554514 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 COPEO14579 308 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 NPTXRO95502 500 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms