RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GTF2BQ00403 316 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 TLE2Q04725 743 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 MGAT3Q09327 533 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 TMEM62Q0P6H9 643 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 STX1AQ16623 288 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 BMT2Q1RMZ1 405 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 LRRC26Q2I0M4 334 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 TRIM60Q495X7 471 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ZC2HC1CQ53FD0 456 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ADGRF1Q5T601 910 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 LRSAM1Q6UWE0 723 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ANKRD33Q7Z3H0 272 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 HAUS6Q7Z4H7 955 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 NECAB2Q7Z6G3 386 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ZNF410Q86VK4 478 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 MYOCDQ8IZQ8 938 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ADSSL1Q8N142 457 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 NME8Q8N427 588 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 GUF1Q8N442 669 aaKnown RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 RNF149Q8NC42 400 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 TET1Q8NFU7 2136 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 DEPTORQ8TB45 409 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ABHD8Q96I13 439 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 NLRP4Q96MN2 994 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 MED15Q96RN5 788 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 FDXACB1Q9BRP7 624 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 GTPBP4Q9BZE4 634 aaKnown RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 IKZF4Q9H2S9 585 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 KCTD10Q9H3F6 313 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 C11orf49Q9H6J7 331 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 MINDY3Q9H8M7 445 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 KCNK12Q9HB15 430 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 IFT122Q9HBG6 1241 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 KMT5AQ9NQR1 393 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 INTS7Q9NVH2 962 aaKnown RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ANO10Q9NW15 660 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 CBLCQ9ULV8 474 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 CDY2AQ9Y6F7 541 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 UBE4BO95155 1302 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 MROH7Q68CQ1 1323 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 ZC3H12DA2A288 527 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 DENND3A2RUS2 1198 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 ABLIM1O14639 778 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 PQBP1O60828 265 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 CSDE1O75534 798 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 CHRNA1P02708 482 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 EDN1P05305 212 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 RPLP2P05387 115 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 CKBP12277 381 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 DARSP14868 501 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 THPOP40225 353 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 MASP1P48740 699 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 CRYBB1P53674 252 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 MBTD1Q05BQ5 628 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 ALCAMQ13740 583 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 TFDP1Q14186 410 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 ANO6Q4KMQ2 910 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 ZCWPW2Q504Y3 356 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 L1TD1Q5T7N2 865 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 ZNF618Q5T7W0 954 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 MROH9Q5TGP6 573 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 CENPPQ6IPU0 288 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 KLHL10Q6JEL2 608 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 RPTNQ6XPR3 784 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 LRRTM3Q86VH5 581 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 GAS2L3Q86XJ1 694 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 NELFCDQ8IXH7 590 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 SLC17A8Q8NDX2 589 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 MFSD3Q96ES6 412 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 KCNJ15Q99712 375 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 NFKBIZQ9BYH8 718 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 CELF4Q9BZC1 486 aaKnown RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 C2orf40Q9H1Z8 148 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 TSPY26PQ9H489 355 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 MAGEC2Q9UBF1 373 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-212ENST00000554486 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 TBX20Q9UMR3 447 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 COQ6Q9Y2Z9 468 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 TRPV2Q9Y5S1 764 aa6.86□□□□□ -1.31
SCFD1-212ENST00000554486 PHLPP2Q6ZVD8 1323 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TEX51A0A1B0GUA7 166 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TRIM49BA6NDI0 452 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TISP43B9A030 160 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 FAM47E-STBD1D6RA91 191 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 H0YCG3 227 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 INO80B-WBP1J3KQ70 363 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 K7ERI5 159 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 HRKO00198 91 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 TGFB1I1O43294 461 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 CAND2O75155 1236 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 PIGRP01833 764 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 KRT1P04264 644 aa6.85□□□□□ -1.31
SCFD1-212ENST00000554486 ASLP04424 464 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms