RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 DCAF17Q5H9S7 520 aaPredicted RBP11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 HECTD3Q5T447 861 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 TCERG1LQ5VWI1 586 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 DGLUCYQ7Z3D6 616 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 FILIP1Q7Z7B0 1213 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 C12orf29Q8N999 325 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 SCAMP5Q8TAC9 235 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 WHAMMQ8TF30 809 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 ATRIPQ8WXE1 791 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 SEMA4DQ92854 862 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 SLC35C1Q96A29 364 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 CHFRQ96EP1 664 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 CYFIP2Q96F07 1278 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 TWNKQ96RR1 684 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 RNF38Q9H0F5 515 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 CISHQ9NSE2 258 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 FAM49BQ9NUQ9 324 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 CHMP5Q9NZZ3 219 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 WNT6Q9Y6F9 365 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 SPAG17Q6Q759 2223 aa11.01□□□□□ -0.65
PTCD2P1-201ENST00000554393 MYOFQ9NZM1 2061 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 E2F8A0AVK6 867 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 BICDL2A1A5D9 508 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 GADD45BO75293 160 aaPredicted RBP11□□□□□ -0.65
PTCD2P1-201ENST00000554393 BEST1O76090 585 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 ABL1P00519 1130 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CD58P19256 250 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 DRD1P21728 446 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 BMP6P22004 513 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 HOXA6P31267 233 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 MAP3K7CLP57077 242 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 UBE2HP62256 183 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 IFRD2Q12894 506 aaPredicted RBP11□□□□□ -0.65
PTCD2P1-201ENST00000554393 FBXO43Q4G163 708 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CBWD6Q4V339 395 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CBWD3Q5JTY5 395 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CBWD5Q5RIA9 395 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 FSTL4Q6MZW2 842 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 TTI2Q6NXR4 508 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 Q6ZS52 159 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CLEC20AQ6ZU45 233 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 TRIML1Q8N9V2 468 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 SUMF1Q8NBK3 374 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 OTUB2Q96DC9 234 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 P2RY13Q9BPV8 354 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 EPC1Q9H2F5 836 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11□□□□□ -0.65
PTCD2P1-201ENST00000554393 TLR8Q9NR97 1041 aaKnown RBP11□□□□□ -0.65
PTCD2P1-201ENST00000554393 RBM12Q9NTZ6 932 aaKnown RBP11□□□□□ -0.65
PTCD2P1-201ENST00000554393 SCML2Q9UQR0 700 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CPQQ9Y646 472 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 NCOR2Q9Y618 2525 aa11□□□□□ -0.65
PTCD2P1-201ENST00000554393 ANKRD11Q6UB99 2663 aaPredicted RBP11□□□□□ -0.65
PTCD2P1-201ENST00000554393 CHURC1-FNTBB4DL54 471 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 HHLA1C9JL84 531 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 P4HA2O15460 535 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 COCHO43405 550 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 TLR5O60602 858 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 ATG13O75143 517 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 GNA14O95837 355 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 MBL2P11226 248 aaPredicted RBP10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 ADORA2BP29275 332 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 YWHAEP62258 255 aaKnown RBP10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 SATB1Q01826 763 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 CUL2Q13617 745 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 ARHGAP17Q68EM7 881 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 TSSK4Q6SA08 328 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 CCDC26Q8TAB7 109 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 NELFBQ8WX92 580 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 CD101Q93033 1021 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 TMEM176AQ96HP8 235 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 DUSP16Q9BY84 665 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 UBXN6Q9BZV1 441 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 GMIPQ9P107 970 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 TBC1D14Q9P2M4 693 aa10.99□□□□□ -0.65
PTCD2P1-201ENST00000554393 EML5Q05BV3 1969 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 K7ESF4 209 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CNR2P34972 360 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 EIF2DP41214 584 aaKnown RBP10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 FMO5P49326 533 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 GALK1P51570 392 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 RAD23BP54727 409 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 MARSP56192 900 aaKnown RBP10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CETN1Q12798 172 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 PAK1Q13153 545 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 ACAP1Q15027 740 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CCDC40Q4G0X9 1142 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 ISM2Q6H9L7 571 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 CCDC186Q7Z3E2 898 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 ADGRG2Q8IZP9 1017 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 ZNF276Q8N554 614 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 SLC4A11Q8NBS3 891 aa10.98□□□□□ -0.65
PTCD2P1-201ENST00000554393 TTC16Q8NEE8 873 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms