RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 RHOT1Q8IXI2 618 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 TTC9BQ8N6N2 239 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 EMC1Q8N766 993 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 MRPL43Q8N983 215 aaKnown RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 CLEC4CQ8WTT0 213 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 POF1BQ8WVV4 589 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 RXFP2Q8WXD0 754 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 OVCA2Q8WZ82 227 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 CENPIQ92674 756 aaPredicted RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 PGAP3Q96FM1 320 aaPredicted RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 PBKQ96KB5 322 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 OSBPL9Q96SU4 736 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 TBCBQ99426 244 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 SEPT5Q99719 369 aaPredicted RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 TCF25Q9BQ70 676 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 C17orf80Q9BSJ5 609 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 TTLL2Q9BWV7 592 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 PBX4Q9BYU1 374 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 LMAN2LQ9H0V9 348 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 CRISPLD1Q9H336 500 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 ENTPD7Q9NQZ7 604 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.01□□□□□ -1.13
TDP1-209ENST00000554180 MSRAQ9UJ68 235 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 SCML2Q9UQR0 700 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 PCDHA3Q9Y5H8 950 aa8.01□□□□□ -1.13
TDP1-209ENST00000554180 COL4A4P53420 1690 aaPredicted RBP8.01□□□□□ -1.13
TDP1-209ENST00000554180 YJEFN3A6XGL0 299 aa8□□□□□ -1.13
TDP1-209ENST00000554180 GRXCR1A8MXD5 290 aa8□□□□□ -1.13
TDP1-209ENST00000554180 E7ENQ6 273 aa8□□□□□ -1.13
TDP1-209ENST00000554180 KCNK3O14649 394 aa8□□□□□ -1.13
TDP1-209ENST00000554180 PRRG1O14668 218 aa8□□□□□ -1.13
TDP1-209ENST00000554180 DDX3YO15523 660 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 NCK2O43639 380 aa8□□□□□ -1.13
TDP1-209ENST00000554180 GRAP2O75791 330 aa8□□□□□ -1.13
TDP1-209ENST00000554180 ENDOD1O94919 500 aa8□□□□□ -1.13
TDP1-209ENST00000554180 ARHGEF15O94989 841 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CXCL14O95715 111 aa8□□□□□ -1.13
TDP1-209ENST00000554180 GLUD1P00367 558 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CSH1P0DML2 217 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CSH2P0DML3 217 aa8□□□□□ -1.13
TDP1-209ENST00000554180 MYOGP15173 224 aa8□□□□□ -1.13
TDP1-209ENST00000554180 YWHAQP27348 245 aa8□□□□□ -1.13
TDP1-209ENST00000554180 ALDH1A3P47895 512 aa8□□□□□ -1.13
TDP1-209ENST00000554180 RGS19P49795 217 aa8□□□□□ -1.13
TDP1-209ENST00000554180 PEX5P50542 639 aa8□□□□□ -1.13
TDP1-209ENST00000554180 RWDD2BP57060 319 aa8□□□□□ -1.13
TDP1-209ENST00000554180 RNASE9P60153 205 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 YWHAGP61981 247 aaKnown RBP eCLIP8□□□□□ -1.13
TDP1-209ENST00000554180 CKAP4Q07065 602 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 VEPH1Q14D04 833 aa8□□□□□ -1.13
TDP1-209ENST00000554180 TAF5Q15542 800 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CCDC14Q49A88 953 aa8□□□□□ -1.13
TDP1-209ENST00000554180 DCAF6Q58WW2 860 aa8□□□□□ -1.13
TDP1-209ENST00000554180 TRNP1Q6NT89 227 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CC2D1AQ6P1N0 951 aaPredicted RBP8□□□□□ -1.13
TDP1-209ENST00000554180 LILRA6Q6PI73 481 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CCDC149Q6ZUS6 474 aa8□□□□□ -1.13
TDP1-209ENST00000554180 BNIPLQ7Z465 357 aa8□□□□□ -1.13
TDP1-209ENST00000554180 VSIG1Q86XK7 387 aa8□□□□□ -1.13
TDP1-209ENST00000554180 KATNAL2Q8IYT4 538 aa8□□□□□ -1.13
TDP1-209ENST00000554180 TDHQ8IZJ6 230 aa8□□□□□ -1.13
TDP1-209ENST00000554180 DEFB106AQ8N104 65 aa8□□□□□ -1.13
TDP1-209ENST00000554180 MNS1Q8NEH6 495 aa8□□□□□ -1.13
TDP1-209ENST00000554180 PDZD8Q8NEN9 1154 aa8□□□□□ -1.13
TDP1-209ENST00000554180 SCAMP5Q8TAC9 235 aa8□□□□□ -1.13
TDP1-209ENST00000554180 AUTS2Q8WXX7 1259 aa8□□□□□ -1.13
TDP1-209ENST00000554180 ALG3Q92685 438 aa8□□□□□ -1.13
TDP1-209ENST00000554180 TRMT2BQ96GJ1 504 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 RPGRIP1Q96KN7 1286 aa8□□□□□ -1.13
TDP1-209ENST00000554180 MYRFLQ96LU7 910 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CFAP57Q96MR6 1250 aa8□□□□□ -1.13
TDP1-209ENST00000554180 KLHL5Q96PQ7 755 aa8□□□□□ -1.13
TDP1-209ENST00000554180 SLITRK1Q96PX8 696 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CDK5RAP1Q96SZ6 601 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 NAP1L3Q99457 506 aaPredicted RBP8□□□□□ -1.13
TDP1-209ENST00000554180 NPY6RQ99463 290 aa8□□□□□ -1.13
TDP1-209ENST00000554180 CYP4F11Q9HBI6 524 aa8□□□□□ -1.13
TDP1-209ENST00000554180 ALG13Q9NP73 1137 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 ABCC13Q9NSE7 274 aa8□□□□□ -1.13
TDP1-209ENST00000554180 DDX56Q9NY93 547 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 CLIC5Q9NZA1 410 aa8□□□□□ -1.13
TDP1-209ENST00000554180 FBXW11Q9UKB1 542 aa8□□□□□ -1.13
TDP1-209ENST00000554180 TTC7AQ9ULT0 858 aaPredicted RBP8□□□□□ -1.13
TDP1-209ENST00000554180 PACSIN2Q9UNF0 486 aaPredicted RBP8□□□□□ -1.13
TDP1-209ENST00000554180 SLC27A5Q9Y2P5 690 aa8□□□□□ -1.13
TDP1-209ENST00000554180 YBX2Q9Y2T7 364 aaKnown RBP8□□□□□ -1.13
TDP1-209ENST00000554180 YIPF1Q9Y548 306 aa8□□□□□ -1.13
TDP1-209ENST00000554180 ASB3Q9Y575 518 aa8□□□□□ -1.13
TDP1-209ENST00000554180 INSL5Q9Y5Q6 135 aa8□□□□□ -1.13
TDP1-209ENST00000554180 MYH10P35580 1976 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 SLC38A8A6NNN8 435 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 CAPN9O14815 690 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 MDM4O15151 490 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 GRM6O15303 877 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 TGM5O43548 720 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 PRPSAP2O60256 369 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 SEC24AO95486 1093 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 F9P00740 461 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 FYNP06241 537 aa7.99□□□□□ -1.13
TDP1-209ENST00000554180 ZDHHC11BP0C7U3 371 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms