RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ABCA4P78363 2273 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DSPP15924 2871 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MICAL3Q7RTP6 2002 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CENPEQ02224 2701 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 A0A0B4J269 797 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TCRBV21S2A2A0A5A6 115 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KANSL1LA0AUZ9 987 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KRBA1A5PL33 1030 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CBX4O00257 560 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DDX3YO15523 660 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RNASEH2AO75792 299 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GFPT2O94808 682 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 YEATS4O95619 227 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 LMNAP02545 664 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HOXB2P14652 356 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GUCY2CP25092 1073 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TARSP26639 723 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CDC25CP30307 473 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RPL9P32969 192 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ATP5C1P36542 298 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 LHX1P48742 406 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 WNT7BP56706 349 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 POLR2FP61218 127 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KCNC4Q03721 635 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 UBXN1Q04323 297 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PAK1Q13153 545 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TSTA3Q13630 321 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RUNX3Q13761 415 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DSC3Q14574 896 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GOLGA7BQ2TAP0 167 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PUS10Q3MIT2 529 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 FILIP1LQ4L180 1135 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SGO2Q562F6 1265 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 NAALADL2Q58DX5 795 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 BSPRYQ5W0U4 402 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RNF43Q68DV7 783 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CENPPQ6IPU0 288 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZPBP2Q6X784 338 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GAREM2Q75VX8 874 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MTSS1LQ765P7 747 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PCGF5Q86SE9 256 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM105Q8N8V8 129 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 OR14C36Q8NHC7 312 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PIK3R5Q8WYR1 880 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF689Q96CS4 500 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CCDC51Q96ER9 411 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 NOX5Q96PH1 765 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CDCA3Q99618 268 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CGRRF1Q99675 332 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 OMDQ99983 421 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 P2RY13Q9BPV8 354 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GPR174Q9BXC1 333 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CALN1Q9BXU9 219 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ULBP1Q9BZM6 244 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF334Q9HCZ1 680 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CUEDC1Q9NWM3 386 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RMND1Q9NWS8 449 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DDIT4Q9NX09 232 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MARCH2Q9P0N8 246 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GCNT4Q9P109 453 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ARHGAP28Q9P2N2 729 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HMGXB4Q9UGU5 601 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 AK5Q9Y6K8 562 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SONP18583 2426 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MYOFQ9NZM1 2061 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 A0A1W2PQH9 124 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TTC26A0AVF1 554 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CFAP69A5D8W1 941 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM149AA5PLN7 773 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CYP26A1O43174 497 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 AKAP3O75969 853 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 IL18RAPO95256 599 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GJB6O95452 261 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 APODP05090 189 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RARGP13631 454 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ADSSP30520 456 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GTF2H1P32780 548 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PRPHP41219 470 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TNNT3P45378 269 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SLC6A11P48066 632 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 NASPP49321 788 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GALK1P51570 392 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SLC5A3P53794 718 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 USP46P62068 366 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SIM1P81133 766 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DAB2P98082 770 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FKBP3Q00688 224 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 NHLH1Q02575 133 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MAPK7Q13164 816 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PTPAQ15257 358 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EXOC3L4Q17RC7 722 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SGSM1Q2NKQ1 1148 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PLEKHG6Q3KR16 790 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 USP39Q53GS9 565 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TRIM61Q5EBN2 209 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM26DQ5JW98 314 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SNAP47Q5SQN1 464 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RASIP1Q5U651 963 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KIAA0319Q5VV43 1072 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KRT39Q6A163 491 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms