RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TMEM105Q8N8V8 129 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 PPTC7Q8NI37 304 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 SUSD6Q92537 303 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 LPPQ93052 612 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 MIEF2Q96C03 454 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 GPHA2Q96T91 129 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 RMDN3Q96TC7 470 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 FSD1Q9BTV5 496 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 CELF4Q9BZC1 486 aaKnown RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 CCDC113Q9H0I3 377 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 S1PR5Q9H228 398 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 SLC6A15Q9H2J7 730 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 ADD3Q9UEY8 706 aaKnown RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 MAD2L2Q9UI95 211 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 MAGEL2Q9UJ55 1249 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 MRPS23Q9Y3D9 190 aaKnown RBP3.65□□□□□ -1.83
SLIRP-202ENST00000553981 LAMA4Q16363 1823 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 DMDP11532 3685 aa3.65□□□□□ -1.83
SLIRP-202ENST00000553981 C5orf42Q9H799 3197 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 SLC12A8A0AV02 714 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 C17orf102A2RUQ5 167 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 C2orf78A6NCI8 922 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM191CA6NGB0 347 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 PI15O43692 258 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 EDIL3O43854 480 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 KPNA6O60684 536 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 HMMRO75330 724 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 H2AFYO75367 372 aaKnown RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 STK10O94804 968 aaKnown RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 RASGRP1O95267 797 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 CFBP00751 764 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 MMP1P03956 469 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ZFYP08048 801 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 GHRP10912 638 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ALADP13716 330 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 MX1P20591 662 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 SP100P23497 879 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 AVPR2P30518 371 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 MAN2A2P49641 1150 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 PDE1AP54750 535 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ANTXR2P58335 489 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 TOB2Q14106 344 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 STXBP2Q15833 593 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 DGKDQ16760 1214 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 FAM102BQ5T8I3 360 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 LAIR1Q6GTX8 287 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 DPY19L2P1Q6NXN4 242 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 SYCE2Q6PIF2 218 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 LRRC55Q6ZSA7 311 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 RBM23Q86U06 439 aaKnown RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 CKAP2LQ8IYA6 745 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 C7orf31Q8N865 590 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 SMRP1Q8NCR6 262 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 GSTCDQ8NEC7 633 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ATP8B4Q8TF62 1192 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 LMBR1Q8WVP7 490 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 TRAPPC12Q8WVT3 735 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 POF1BQ8WVV4 589 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 DNAJB3Q8WWF6 145 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ERCC4Q92889 916 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ATP6V0A1Q93050 837 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 FOXRED1Q96CU9 486 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 SLC7A6OSQ96CW6 309 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 RPL10LQ96L21 214 aaKnown RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 SPATA33Q96N06 139 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 PIGSQ96S52 555 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 APOL5Q9BWW9 433 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 CWH43Q9H720 699 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 NRDE2Q9H7Z3 1164 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 USP15Q9Y4E8 981 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 RBM8AQ9Y5S9 174 aaKnown RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 TNFRSF18Q9Y5U5 241 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ARHGEF17Q96PE2 2063 aaPredicted RBP3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ABCB11O95342 1321 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 FRMPD4Q14CM0 1322 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 TTC41PQ6P2S7 1318 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 ADGRA3Q8IWK6 1321 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 MYO15AQ9UKN7 3530 aa3.64□□□□□ -1.83
SLIRP-202ENST00000553981 WDFY4Q6ZS81 3184 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 DCHS1Q96JQ0 3298 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 MED19A0JLT2 244 aaPredicted RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 MBLAC1A4D2B0 266 aaPredicted RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 HIDE1A8MVS5 230 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 MEIS2O14770 477 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 EFCAB14O75071 495 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 PPFIA4O75335 1185 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 EIF3JO75822 258 aaKnown RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 IGHDP01880 384 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 WEE2P0C1S8 567 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 KCNA2P16389 499 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 SDSP20132 328 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 CD52P31358 61 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 ICAM3P32942 547 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 CTNNB1P35222 781 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 PBX3P40426 434 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 NRIP1P48552 1158 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 SESN2P58004 480 aaPredicted RBP3.63□□□□□ -1.83
SLIRP-202ENST00000553981 BPIFB4P59827 614 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 COASYQ13057 564 aa3.63□□□□□ -1.83
SLIRP-202ENST00000553981 ELAVL1Q15717 326 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms