RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 K7EQS6 105 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 RNF225M0QZC1 329 aaPredicted RBP19.23■□□□□ 0.67
SHMT2-206ENST00000553529 PSMA7O14818 248 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 TLR5O60602 858 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 HNRNPLP14866 589 aaKnown RBP eCLIP19.23■□□□□ 0.67
SHMT2-206ENST00000553529 APBA1Q02410 837 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 CCDC40Q4G0X9 1142 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 LY6G5CQ5SRR4 150 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 SNX30Q5VWJ9 437 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 LMO3Q8TAP4 145 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 UBA3Q8TBC4 463 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 TFAP2BQ92481 460 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 DHTKD1Q96HY7 919 aaPredicted RBP19.23■□□□□ 0.67
SHMT2-206ENST00000553529 DUSP16Q9BY84 665 aa19.23■□□□□ 0.67
SHMT2-206ENST00000553529 FRYLO94915 3013 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 PIK3R2O00459 728 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 NFATC1O95644 943 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 PPP3CCP48454 512 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 KIF11P52732 1056 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 C2orf27AQ580R0 203 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 MAMSTRQ6ZN01 415 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 RRAGAQ7L523 313 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 PIGZQ86VD9 579 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 CCDC33Q8N5R6 958 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 CCDC150Q8NCX0 1101 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 PDZD8Q8NEN9 1154 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 OVCA2Q8WZ82 227 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 KLF16Q9BXK1 252 aaPredicted RBP19.22■□□□□ 0.67
SHMT2-206ENST00000553529 EHD2Q9NZN4 543 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
SHMT2-206ENST00000553529 SCML2Q9UQR0 700 aa19.22■□□□□ 0.67
SHMT2-206ENST00000553529 DCHS1Q96JQ0 3298 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 GABBR2O75899 941 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 RARGP13631 454 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 CCDC6Q16204 474 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 C1orf228Q6PIY5 440 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 BHLHA9Q7RTU4 235 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 TMEM25Q86YD3 366 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 ELOA2Q8IYF1 753 aaPredicted RBP19.21■□□□□ 0.67
SHMT2-206ENST00000553529 NACA2Q9H009 215 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 TSPAN16Q9UKR8 245 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 INVSQ9Y283 1065 aa19.21■□□□□ 0.67
SHMT2-206ENST00000553529 DCLK1O15075 740 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 HMBSP08397 361 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 PFKLP17858 780 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 TGM1P22735 817 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 PDE6CP51160 858 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 PDE4CQ08493 712 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 GJB7Q6PEY0 223 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 PHTF2Q8N3S3 785 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 RUBCNQ92622 972 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 BHMTQ93088 406 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 RMDN1Q96DB5 314 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 IER2Q9BTL4 223 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 SRRTQ9BXP5 876 aaKnown RBP19.2■□□□□ 0.66
SHMT2-206ENST00000553529 CYLDQ9NQC7 956 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 TLR8Q9NR97 1041 aaKnown RBP19.2■□□□□ 0.66
SHMT2-206ENST00000553529 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHMT2-206ENST00000553529 CHMP5Q9NZZ3 219 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 NCDNQ9UBB6 729 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 HOOK1Q9UJC3 728 aaKnown RBP19.2■□□□□ 0.66
SHMT2-206ENST00000553529 NAGPAQ9UK23 515 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 HCN2Q9UL51 889 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 SH3BP1Q9Y3L3 701 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 OTOGLQ3ZCN5 2332 aa19.2■□□□□ 0.66
SHMT2-206ENST00000553529 FAM186AA6NE01 2351 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 STX10O60499 249 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 PAPSS2O95340 614 aaPredicted RBP19.19■□□□□ 0.66
SHMT2-206ENST00000553529 ADH5P11766 374 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 CD19P15391 556 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 DRD1P21728 446 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 BRD2P25440 801 aaKnown RBP19.19■□□□□ 0.66
SHMT2-206ENST00000553529 TUBP50607 506 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 PAK1Q13153 545 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 STIM1Q13586 685 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 ARHGAP17Q68EM7 881 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 TPGS1Q6ZTW0 290 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 LONP2Q86WA8 852 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 MIB1Q86YT6 1006 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 CEP63Q96MT8 703 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 KREMEN1Q96MU8 473 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 ULBP1Q9BZM6 244 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 SEMA4AQ9H3S1 761 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 FBXO44Q9H4M3 255 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 ACP6Q9NPH0 428 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 USP3Q9Y6I4 520 aa19.19■□□□□ 0.66
SHMT2-206ENST00000553529 DMXL1Q9Y485 3027 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 E2F8A0AVK6 867 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 KLKB1P03952 638 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 TIE1P35590 1138 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 RGS7P49802 495 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 UBE2HP62256 183 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 SPEM2Q0P670 501 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 SIM2Q14190 667 aaPredicted RBP19.18■□□□□ 0.66
SHMT2-206ENST00000553529 DMC1Q14565 340 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 ANO4Q32M45 955 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 C10orf120Q5SQS8 335 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 TMEM270Q6UE05 265 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
SHMT2-206ENST00000553529 SYNPOQ8N3V7 929 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms