RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 A1BGP04217 495 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 MYL3P08590 195 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 ZNF543Q08ER8 600 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 SAFBQ15424 915 aaKnown RBP eCLIP7.84□□□□□ -1.15
PCNX1-205ENST00000553508 MANEALQ5VSG8 457 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 KSR2Q6VAB6 950 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 SFTPA1Q8IWL2 248 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 CTHRC1Q96CG8 243 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 C5orf34Q96MH7 638 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 SARGQ9BW04 601 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 QTRT1Q9BXR0 403 aaKnown RBP7.84□□□□□ -1.15
PCNX1-205ENST00000553508 SLC29A3Q9BZD2 475 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 GJB4Q9NTQ9 266 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 FLRT1Q9NZU1 646 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 DNAJB11Q9UBS4 358 aa7.84□□□□□ -1.15
PCNX1-205ENST00000553508 NKX1-2Q9UD57 310 aaPredicted RBP7.84□□□□□ -1.15
PCNX1-205ENST00000553508 DNAJC9-AS1A6NH13 148 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 POC1B-GALNT4F8VUJ3 575 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 H7C1Q1 480 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 THAP12O43422 761 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 SNX2O60749 519 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 GCATO75600 419 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 SLC5A1P13866 664 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 EPHB2P29323 1055 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 DIO1P49895 249 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 USP49Q70CQ1 688 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 BCDIN3DQ7Z5W3 292 aaKnown RBP7.83□□□□□ -1.16
PCNX1-205ENST00000553508 GALNT4Q8N4A0 578 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 ATP11CQ8NB49 1132 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 WDYHV1Q96HA8 205 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 CCDC17Q96LX7 622 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 SNX15Q9NRS6 342 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 ASIC5Q9NY37 505 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 ASAP1Q9ULH1 1129 aa7.83□□□□□ -1.16
PCNX1-205ENST00000553508 TCRBV5S1A1TA0A578 114 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 WDR91A4D1P6 747 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 FOXN3O00409 490 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-205ENST00000553508 PMM2O15305 246 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 CDK4P11802 303 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 PRIM2P49643 509 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
PCNX1-205ENST00000553508 CERKLQ49MI3 558 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-205ENST00000553508 KIAA1614Q5VZ46 1190 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 YTHDF3Q7Z739 585 aaKnown RBP7.82□□□□□ -1.16
PCNX1-205ENST00000553508 ZNF668Q96K58 619 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-205ENST00000553508 HEYLQ9NQ87 328 aaPredicted RBP7.82□□□□□ -1.16
PCNX1-205ENST00000553508 SLC27A6Q9Y2P4 619 aa7.82□□□□□ -1.16
PCNX1-205ENST00000553508 UBE2Q2LH0YL09 131 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 LATS1O95835 1130 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 PRR35P0CG20 571 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 MCM5P33992 734 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 DEUP1Q05D60 604 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 FAM187BQ17R55 369 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 AWAT1Q58HT5 328 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 MZT2AQ6P582 158 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 CATSPERGQ6ZRH7 1159 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 FSTL5Q8N475 847 aaPredicted RBP7.81□□□□□ -1.16
PCNX1-205ENST00000553508 CCDC136Q96JN2 1154 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 PDGFCQ9NRA1 345 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 STEAP1Q9UHE8 339 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 CAPN11Q9UMQ6 739 aa7.81□□□□□ -1.16
PCNX1-205ENST00000553508 PPP6CO00743 305 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 MT-CO3P00414 261 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 CD19P15391 556 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 LMO1P25800 156 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 CERS1P27544 350 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 ATICP31939 592 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 STT3AP46977 705 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 CASP5P51878 434 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 MTX3Q5HYI7 312 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 DENND2CQ68D51 928 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 MIS18BP1Q6P0N0 1132 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 TMEM65Q6PI78 240 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 ADAMTS18Q8TE60 1221 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 HS6ST2Q96MM7 605 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 SLC25A32Q9H2D1 315 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 TNFRSF18Q9Y5U5 241 aa7.8□□□□□ -1.16
PCNX1-205ENST00000553508 M0R3H8 397 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 TMPRSS11DO60235 418 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 CYP2A6P11509 494 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-205ENST00000553508 TRIM27P14373 513 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 KELP23276 732 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 IFIT5Q13325 482 aaKnown RBP7.79□□□□□ -1.16
PCNX1-205ENST00000553508 SUPT20HL1Q3ZLR7 823 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 SLC18B1Q6NT16 456 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 CRTC1Q6UUV9 634 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 CNGA4Q8IV77 575 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 MAFAQ8NHW3 353 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-205ENST00000553508 FYTTD1Q96QD9 318 aaKnown RBP7.79□□□□□ -1.16
PCNX1-205ENST00000553508 NAA15Q9BXJ9 866 aaKnown RBP7.79□□□□□ -1.16
PCNX1-205ENST00000553508 USP29Q9HBJ7 922 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 TRIM36Q9NQ86 728 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 RNF7Q9UBF6 113 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 RGS17Q9UGC6 210 aaPredicted RBP7.79□□□□□ -1.16
PCNX1-205ENST00000553508 VPS51Q9UID3 782 aa7.79□□□□□ -1.16
PCNX1-205ENST00000553508 A0A087WZ62 844 aa7.78□□□□□ -1.16
PCNX1-205ENST00000553508 CA12O43570 354 aa7.78□□□□□ -1.16
PCNX1-205ENST00000553508 TUBB4AP04350 444 aa7.78□□□□□ -1.16
PCNX1-205ENST00000553508 APEHP13798 732 aaKnown RBP7.78□□□□□ -1.16
PCNX1-205ENST00000553508 TSHRP16473 764 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms