RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RAD23BP54727 409 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 UBE2HP62256 183 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 CUL2Q13617 745 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 DHCR24Q15392 516 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 NAIF1Q69YI7 327 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-207ENST00000553290 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 GPRIN1Q7Z2K8 1008 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 NELFBQ8WX92 580 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 JAKMIP2Q96AA8 810 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 ARID3AQ99856 593 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 UBXN6Q9BZV1 441 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 CYLDQ9NQC7 956 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 NCDNQ9UBB6 729 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 RAB23Q9ULC3 237 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 SLC8A2Q9UPR5 921 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 ATG2BQ96BY7 2078 aa13.67□□□□□ -0.22
ACTN1-207ENST00000553290 BIN1O00499 593 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 CYP26A1O43174 497 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 ADH1CP00326 375 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 TBXAS1P24557 533 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-207ENST00000553290 ATP5C1P36542 298 aaKnown RBP13.66□□□□□ -0.22
ACTN1-207ENST00000553290 OPRD1P41143 372 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 EIF2DP41214 584 aaKnown RBP13.66□□□□□ -0.22
ACTN1-207ENST00000553290 FMO5P49326 533 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 SLC8A3P57103 927 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 GOLGA8FQ08AF8 430 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 GOLGA8DPQ0D2H9 430 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 CETN1Q12798 172 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 PAK1Q13153 545 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 ARHGAP17Q68EM7 881 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 HEATR6Q6AI08 1181 aaKnown RBP13.66□□□□□ -0.22
ACTN1-207ENST00000553290 PKN3Q6P5Z2 889 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 RHBDF2Q6PJF5 856 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 TADA2BQ86TJ2 420 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 WDR5BQ86VZ2 330 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 ZNF276Q8N554 614 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 CAMKK1Q8N5S9 505 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 GPR161Q8N6U8 529 aaKnown RBP13.66□□□□□ -0.22
ACTN1-207ENST00000553290 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 ACDQ96AP0 544 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 CTNND2Q9UQB3 1225 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 USP3Q9Y6I4 520 aa13.66□□□□□ -0.22
ACTN1-207ENST00000553290 CCDC163A0A0D9SF12 145 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 A0A1W2PQH9 124 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 P4HA2O15460 535 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 GNA14O95837 355 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 PGFP49763 221 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 GAD2Q05329 585 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 DMWDQ09019 674 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 GAB4Q2WGN9 574 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 LAIR1Q6GTX8 287 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 SYT13Q7L8C5 426 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 KIAA2013Q8IYS2 634 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 DCLK2Q8N568 766 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 ANKRD52Q8NB46 1076 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 RPLP0P6Q8NHW5 317 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 EZH1Q92800 747 aaPredicted RBP13.65□□□□□ -0.22
ACTN1-207ENST00000553290 NT5C1BQ96P26 610 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 CDK5RAP1Q96SZ6 601 aaKnown RBP13.65□□□□□ -0.22
ACTN1-207ENST00000553290 PNKPQ96T60 521 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
ACTN1-207ENST00000553290 DNMT3LQ9UJW3 386 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 NAGPAQ9UK23 515 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 LSM7Q9UK45 103 aaKnown RBP13.65□□□□□ -0.22
ACTN1-207ENST00000553290 GMEB2Q9UKD1 530 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 KIAA1257Q9ULG3 409 aa13.65□□□□□ -0.22
ACTN1-207ENST00000553290 MYOFQ9NZM1 2061 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 SCAMP3O14828 347 aaKnown RBP13.64□□□□□ -0.23
ACTN1-207ENST00000553290 HRO43593 1189 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
ACTN1-207ENST00000553290 TBX18O95935 607 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 IRF1P10914 325 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 RALAP11233 206 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 ADH5P11766 374 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 RARGP13631 454 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 PLA2G4AP47712 749 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 SIM2Q14190 667 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-207ENST00000553290 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-207ENST00000553290 RAB41Q5JT25 222 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 LY6G5CQ5SRR4 150 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 PRR23BQ6ZRT6 265 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 HTR3DQ70Z44 454 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 BBS7Q8IWZ6 715 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 ARHGAP18Q8N392 663 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 KLF16Q9BXK1 252 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-207ENST00000553290 NMUR1Q9HB89 426 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 SPHK2Q9NRA0 654 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 OSER1Q9NX31 292 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 CLIC5Q9NZA1 410 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 KIAA1549LQ6ZVL6 1849 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 GPR179Q6PRD1 2367 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 DMXL1Q9Y485 3027 aa13.64□□□□□ -0.23
ACTN1-207ENST00000553290 SPTBN4Q9H254 2564 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms