RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ASIC2Q16515 512 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 SFMBT2Q5VUG0 894 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 SCD5Q86SK9 330 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 TMEM110Q86TL2 294 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 CPLX3Q8WVH0 158 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 PPP1R13BQ96KQ4 1090 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 RPP25Q9BUL9 199 aaKnown RBP19.61■□□□□ 0.73
DDX54-209ENST00000551912 SMG9Q9H0W8 520 aaKnown RBP19.61■□□□□ 0.73
DDX54-209ENST00000551912 NUCKS1Q9H1E3 243 aaKnown RBP19.61■□□□□ 0.73
DDX54-209ENST00000551912 NMUR1Q9HB89 426 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 TDP1Q9NUW8 608 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 AIPL1Q9NZN9 384 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 MUTYHQ9UIF7 546 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 CAPN11Q9UMQ6 739 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 SORCS3Q9UPU3 1222 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 MUC3AQ02505 3323 aa19.61■□□□□ 0.73
DDX54-209ENST00000551912 NUP210Q8TEM1 1887 aaPredicted RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 HEPACAM2A8MVW5 462 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 AP5Z1O43299 807 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 COCHO43405 550 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 TLR5O60602 858 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 OLFM2O95897 454 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 GYPCP04921 128 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 RALAP11233 206 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 CHRNB2P17787 502 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 CDH5P33151 784 aaPredicted RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 SNX16P57768 344 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 DAOAP59103 153 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 YWHAGP61981 247 aaKnown RBP eCLIP19.6■□□□□ 0.73
DDX54-209ENST00000551912 ZBED6P86452 979 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 FMO1Q01740 532 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 TRIM14Q14142 442 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 IRF2BP2Q7Z5L9 587 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 TADA2BQ86TJ2 420 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 VSTM4Q8IW00 320 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 SLC44A3Q8N4M1 653 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 CELF5Q8N6W0 485 aaKnown RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 IRGQQ8WZA9 623 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 NDRG1Q92597 394 aaKnown RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 USP13Q92995 863 aaPredicted RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 NACA2Q9H009 215 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 MIS12Q9H081 205 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 RNF38Q9H0F5 515 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 CCSER2Q9H7U1 834 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 KIF9Q9HAQ2 790 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 OSER1Q9NX31 292 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 OBP2AQ9NY56 170 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 CLIC5Q9NZA1 410 aa19.6■□□□□ 0.73
DDX54-209ENST00000551912 LUC7L2Q9Y383 392 aaKnown RBP19.6■□□□□ 0.73
DDX54-209ENST00000551912 E5RJQ4 531 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 SART1O43290 800 aaKnown RBP19.59■□□□□ 0.73
DDX54-209ENST00000551912 MBL2P11226 248 aaPredicted RBP19.59■□□□□ 0.73
DDX54-209ENST00000551912 RARGP13631 454 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 SLC7A9P82251 487 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 VITQ6UXI7 678 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 TRIM72Q6ZMU5 477 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 BHLHA9Q7RTU4 235 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 SCUBE3Q8IX30 993 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 IPO4Q8TEX9 1081 aaKnown RBP19.59■□□□□ 0.73
DDX54-209ENST00000551912 DEPDC1BQ8WUY9 529 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 RSPRY1Q96DX4 576 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 CPXM1Q96SM3 734 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 CDK5RAP1Q96SZ6 601 aaKnown RBP19.59■□□□□ 0.73
DDX54-209ENST00000551912 AGPAT1Q99943 283 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 PLA2G2FQ9BZM2 168 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 SYNCQ9H7C4 482 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.59■□□□□ 0.738e-9■■■■■ 33.2
DDX54-209ENST00000551912 ARHGAP26Q9UNA1 814 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 CCL26Q9Y258 94 aa19.59■□□□□ 0.73
DDX54-209ENST00000551912 BDP1A6H8Y1 2624 aa19.58■□□□□ 0.73
DDX54-209ENST00000551912 YJEFN3A6XGL0 299 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 E7ENQ6 273 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 PSMC3P17980 439 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 ATP5C1P36542 298 aaKnown RBP19.58■□□□□ 0.72
DDX54-209ENST00000551912 NOMO3P69849 1222 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 PTPN20Q4JDL3 420 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 BTBD8Q5XKL5 378 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 MFSD6LQ8IWD5 586 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 ZNF276Q8N554 614 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 MSANTD4Q8NCY6 345 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 CLEC4CQ8WTT0 213 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 SYN2Q92777 582 aaPredicted RBP19.58■□□□□ 0.72
DDX54-209ENST00000551912 GOLGA1Q92805 767 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 CPQQ9Y646 472 aa19.58■□□□□ 0.72
DDX54-209ENST00000551912 TNFRSF10AO00220 468 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 PAPSS1O43252 624 aaPredicted RBP19.57■□□□□ 0.72
DDX54-209ENST00000551912 CYP1A1P04798 512 aaPredicted RBP19.57■□□□□ 0.72
DDX54-209ENST00000551912 TPM1P09493 284 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 CASP14P31944 242 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 PRKCIP41743 596 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 GRM2Q14416 872 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 C10orf120Q5SQS8 335 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 NAA35Q5VZE5 725 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 BSPRYQ5W0U4 402 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 E4F1Q66K89 784 aaPredicted RBP19.57■□□□□ 0.72
DDX54-209ENST00000551912 KLHDC10Q6PID8 442 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 ERICH1Q86X53 443 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 YAF2Q8IY57 180 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 UBALD2Q8IYN6 164 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms