RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SPHK2Q9NRA0 654 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.29■□□□□ 0.2
CACNB3-220ENST00000551716 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-220ENST00000551716 SCAMP3O14828 347 aaKnown RBP16.28■□□□□ 0.2
CACNB3-220ENST00000551716 TNFSF14O43557 240 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 ATP2C2O75185 946 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
CACNB3-220ENST00000551716 KRT19P08727 400 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 NEK4P51957 841 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 ZNF132P52740 706 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 CYP27A1Q02318 531 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 MYCBPAPQ8TBZ2 947 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 OVCA2Q8WZ82 227 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 HVCN1Q96D96 273 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 XPO6Q96QU8 1125 aaKnown RBP16.28■□□□□ 0.2
CACNB3-220ENST00000551716 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 PRORYQ9H606 182 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 WDR35Q9P2L0 1181 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 EXOC7Q9UPT5 735 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 NAV2Q8IVL1 2488 aa16.28■□□□□ 0.2
CACNB3-220ENST00000551716 RRP8O43159 456 aaKnown RBP16.27■□□□□ 0.2
CACNB3-220ENST00000551716 NCAM1P13591 858 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 STARD3Q14849 445 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 HECTD3Q5T447 861 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 EGFLAMQ63HQ2 1017 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
CACNB3-220ENST00000551716 KIAA1324Q6UXG2 1013 aaKnown RBP16.27■□□□□ 0.2
CACNB3-220ENST00000551716 TMPRSS12Q86WS5 348 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 MIB1Q86YT6 1006 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 ZCCHC9Q8N567 271 aaKnown RBP16.27■□□□□ 0.2
CACNB3-220ENST00000551716 TOE1Q96GM8 510 aaKnown RBP16.27■□□□□ 0.2
CACNB3-220ENST00000551716 CRELD1Q96HD1 420 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 AK8Q96MA6 479 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 FIZ1Q96SL8 496 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 FAM213AQ9BRX8 229 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 IL21RQ9HBE5 538 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 ITM2CQ9NQX7 267 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 WSB2Q9NYS7 404 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-220ENST00000551716 HCN2Q9UL51 889 aa16.27■□□□□ 0.2
CACNB3-220ENST00000551716 ANK1P16157 1881 aa16.27■□□□□ 0.19
CACNB3-220ENST00000551716 MYH11P35749 1972 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 ANAPC1Q9H1A4 1944 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 GOLGA8CPA6NN73 597 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 METTL12A8MUP2 240 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 TISP43B9A030 160 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 F8VP50 259 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 J3QKU1 62 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 RTN3O95197 1032 aaPredicted RBP16.26■□□□□ 0.19
CACNB3-220ENST00000551716 CDK4P11802 303 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 LMO2P25791 158 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 YWHAQP27348 245 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 ADSSP30520 456 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 DHX8Q14562 1220 aaKnown RBP16.26■□□□□ 0.19
CACNB3-220ENST00000551716 E2F5Q15329 346 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 CCDC142Q17RM4 750 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 RILPL1Q5EBL4 403 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 TMEM25Q86YD3 366 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 BRSK2Q8IWQ3 736 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 ZNF843Q8N446 348 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 CXorf38Q8TB03 319 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 PCED1BQ96HM7 432 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 ACOX2Q99424 681 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 GPR174Q9BXC1 333 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 CRTAC1Q9NQ79 661 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 DNAJC17Q9NVM6 304 aaKnown RBP16.26■□□□□ 0.19
CACNB3-220ENST00000551716 LIMCH1Q9UPQ0 1083 aa16.26■□□□□ 0.19
CACNB3-220ENST00000551716 FNDC3AQ9Y2H6 1198 aaKnown RBP16.26■□□□□ 0.19
CACNB3-220ENST00000551716 MYO18AQ92614 2054 aaKnown RBP16.26■□□□□ 0.19
CACNB3-220ENST00000551716 ZNF462Q96JM2 2506 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 CEP192Q8TEP8 1941 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 GOLGA4Q13439 2230 aaKnown RBP16.25■□□□□ 0.19
CACNB3-220ENST00000551716 VWA3AA6NCI4 1184 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 NPC1O15118 1278 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 WARSP23381 471 aaKnown RBP16.25■□□□□ 0.19
CACNB3-220ENST00000551716 UBA7P41226 1012 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 GRK6P43250 576 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 TUBP50607 506 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
CACNB3-220ENST00000551716 ZNF720Q7Z2F6 126 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 BBS7Q8IWZ6 715 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 NUP93Q8N1F7 819 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 KRI1Q8N9T8 703 aaKnown RBP16.25■□□□□ 0.19
CACNB3-220ENST00000551716 NXPE2Q96DL1 559 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 HPDLQ96IR7 371 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 ELOVL4Q9GZR5 314 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 PCED1AQ9H1Q7 454 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 RBAKQ9NYW8 714 aaPredicted RBP16.25■□□□□ 0.19
CACNB3-220ENST00000551716 TCHHQ07283 1943 aa16.25■□□□□ 0.19
CACNB3-220ENST00000551716 TEX51A0A1B0GUA7 166 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 FAM149AA5PLN7 773 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 COCHO43405 550 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 HCRTO43612 131 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 CACNG3O60359 315 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 PDGFRBP09619 1106 aa16.24■□□□□ 0.19
CACNB3-220ENST00000551716 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms