RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.58■□□□□ 0.89
SSH1-209ENST00000551165 TTC3P53804 2025 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 YJEFN3A6XGL0 299 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 E7ENQ6 273 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 ENDOD1O94919 500 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 SYF2O95926 243 aaKnown RBP20.58■□□□□ 0.88
SSH1-209ENST00000551165 USP17L7P0C7H9 530 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 ZSCAN5DPP0CG00 497 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 ETS1P14921 441 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 DPYSL3Q14195 570 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 UAP1Q16222 522 aaPredicted RBP20.58■□□□□ 0.88
SSH1-209ENST00000551165 DCAF6Q58WW2 860 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 EFHC1Q5JVL4 640 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 SMARCD1Q96GM5 515 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 RUNDC3BQ96NL0 473 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 FAM193BQ96PV7 902 aaPredicted RBP20.58■□□□□ 0.88
SSH1-209ENST00000551165 DSEQ9UL01 958 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 PCDHB8Q9UN66 801 aa20.58■□□□□ 0.88
SSH1-209ENST00000551165 LAMA2P24043 3122 aaKnown RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 PECAM1P16284 738 aaPredicted RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 SCNN1AP37088 669 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 MATKP42679 507 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 YWHAZP63104 245 aaKnown RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 YWHAHQ04917 246 aaPredicted RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 BYSLQ13895 437 aaKnown RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 RFX6Q8HWS3 928 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 ABI1Q8IZP0 508 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 CCDC185Q8N715 623 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 ACTL9Q8TC94 416 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 TMPRSS4Q9NRS4 437 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 ASIC3Q9UHC3 531 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 NAALADL1Q9UQQ1 740 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 SYNJ2BP-COX16A0A087WUM0 186 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 POLR3GO15318 223 aaPredicted RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 HSPA9P38646 679 aaKnown RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 OTUD4Q01804 1114 aaKnown RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 RAB41Q5JT25 222 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 NPNTQ6UXI9 565 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 VWCEQ96DN2 955 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 ZIM3Q96PE6 472 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 FMO2Q99518 471 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 ELAC1Q9H777 363 aaKnown RBP20.57■□□□□ 0.88
SSH1-209ENST00000551165 CSNK1G1Q9HCP0 422 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 HOMER3Q9NSC5 361 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 COX16Q9P0S2 106 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 KANSL3Q9P2N6 904 aa20.57■□□□□ 0.88
SSH1-209ENST00000551165 GOLGA6BA6NDN3 693 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 NT5C1B-RDH14C9J2C7 533 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 HSF2BPO75031 334 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 TYMPP19971 482 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 PTK6Q13882 451 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 UBAP2Q5T6F2 1119 aaKnown RBP20.56■□□□□ 0.88
SSH1-209ENST00000551165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.56■□□□□ 0.88
SSH1-209ENST00000551165 BBS12Q6ZW61 710 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 ARCQ7LC44 396 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 BHLHA9Q7RTU4 235 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 MREGQ8N565 214 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 ZNF333Q96JL9 665 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 TMEM121Q9BTD3 319 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 ZNF148Q9UQR1 794 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 NLRC5Q86WI3 1866 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 TADA2AO75478 443 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 SULT1E1P49888 294 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 GYS2P54840 703 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 DAOAP59103 153 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 OASLQ15646 514 aaKnown RBP20.56■□□□□ 0.88
SSH1-209ENST00000551165 TMC3Q7Z5M5 1100 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 FAM131BQ86XD5 332 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 THEM5Q8N1Q8 247 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 ADAM32Q8TC27 787 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■■■■■ 56.2
SSH1-209ENST00000551165 GPR62Q9BZJ7 368 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 PCDH18Q9HCL0 1135 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 LRFN2Q9ULH4 789 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 ATP11BQ9Y2G3 1177 aa20.56■□□□□ 0.88
SSH1-209ENST00000551165 DCDC2CA8MYV0 355 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 COL6A1P12109 1028 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 CYP2F1P24903 491 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 HSD17B3P37058 310 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 DHX9Q08211 1270 aaKnown RBP20.55■□□□□ 0.88
SSH1-209ENST00000551165 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 PPP6R3Q5H9R7 873 aaPredicted RBP20.55■□□□□ 0.88
SSH1-209ENST00000551165 TMEM173Q86WV6 379 aaPredicted RBP20.55■□□□□ 0.88
SSH1-209ENST00000551165 IQCKQ8N0W5 287 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 STKLD1Q8NE28 680 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 SLC35B2Q8TB61 432 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 ART4Q93070 314 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 EFR3BQ9Y2G0 817 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 TANC1Q9C0D5 1861 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 VWA8A3KMH1 1905 aa20.55■□□□□ 0.88
SSH1-209ENST00000551165 TMEM189-UBE2V1I3L0A0 370 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 DAB1O75553 588 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 CXCL10P02778 98 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 SLC11A1P49279 550 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 KRT81Q14533 505 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 SLC25A52Q3SY17 297 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 GSTA5Q7RTV2 222 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 CEP57Q86XR8 500 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 PYROXD2Q8N2H3 581 aa20.54■□□□□ 0.88
SSH1-209ENST00000551165 SCAMP5Q8TAC9 235 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms