RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ITPRIPL2Q3MIP1 535 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 BTBD8Q5XKL5 378 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 LRSAM1Q6UWE0 723 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 VITQ6UXI7 678 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ZNF852Q6ZMS4 543 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 RSRC2Q7L4I2 434 aaKnown RBP10.55□□□□□ -0.72
PFDN5-213ENST00000550964 BEND5Q7L4P6 421 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 TMEM150AQ86TG1 271 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 RALGPS2Q86X27 583 aaPredicted RBP10.55□□□□□ -0.72
PFDN5-213ENST00000550964 FAM71AQ8IYT1 594 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 CPA6Q8N4T0 437 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 FBXL6Q8N531 539 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ZMIZ2Q8NF64 920 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ZNF397Q8NF99 534 aaPredicted RBP10.55□□□□□ -0.72
PFDN5-213ENST00000550964 IPO4Q8TEX9 1081 aaKnown RBP10.55□□□□□ -0.72
PFDN5-213ENST00000550964 RNF139Q8WU17 664 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 SLC35F5Q8WV83 523 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ELMO3Q96BJ8 720 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ZSWIM3Q96MP5 696 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 LSM14BQ9BX40 385 aaKnown RBP10.55□□□□□ -0.72
PFDN5-213ENST00000550964 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 ARHGEF3Q9NR81 526 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 DNMT3LQ9UJW3 386 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 NAGPAQ9UK23 515 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 SH3BP1Q9Y3L3 701 aa10.55□□□□□ -0.72
PFDN5-213ENST00000550964 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
PFDN5-213ENST00000550964 HHLA1C9JL84 531 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 GLI1P08151 1106 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 FCARP24071 287 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 VIPR2P41587 438 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 CACNA2D1P54289 1103 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 STARD6P59095 220 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 ZNF445P59923 1031 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 USP46P62068 366 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 KCNMA1Q12791 1236 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 MTF1Q14872 753 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 DRAP1Q14919 205 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 IQCB1Q15051 598 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 MLF2Q15773 248 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 CCDC142Q17RM4 750 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 PKDCCQ504Y2 493 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 SLC44A4Q53GD3 710 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 TRIM72Q6ZMU5 477 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 TTC30AQ86WT1 665 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 DHX40Q8IX18 779 aaKnown RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 ARL14EPQ8N8R7 260 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 TMEM35BQ8NCS4 154 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 SCAMP5Q8TAC9 235 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 OSCP1Q8WVF1 389 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 RSAD2Q8WXG1 361 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 USP13Q92995 863 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 EPHX3Q9H6B9 360 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 SIX2Q9NPC8 291 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 ST7Q9NRC1 585 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 DUS2Q9NX74 493 aaKnown RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 HCN4Q9Y3Q4 1203 aa10.54□□□□□ -0.72
PFDN5-213ENST00000550964 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
PFDN5-213ENST00000550964 TECTAO75443 2155 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 KANSL1LA0AUZ9 987 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 C2orf78A6NCI8 922 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 FOXN3O00409 490 aaPredicted RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 CYP26A1O43174 497 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 TADA3O75528 432 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 BEST1O76090 585 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 CFHP08603 1231 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 TPM1P09493 284 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 RARGP13631 454 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 FERP16591 822 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 DESP17661 470 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 BRD2P25440 801 aaKnown RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 SOX5P35711 763 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 CHKAP35790 457 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 GPD2P43304 727 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 RPL34P49207 117 aaKnown RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 UBASH3AP57075 661 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 POLR2FP61218 127 aaKnown RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 YWHAGP61981 247 aaKnown RBP eCLIP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 USP4Q13107 963 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 RUNX3Q13761 415 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 LRRC32Q14392 662 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 PPP2R5DQ14738 602 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 FIGNQ5HY92 759 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 EFHC1Q5JVL4 640 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 C10orf120Q5SQS8 335 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 ACBD5Q5T8D3 534 aaPredicted RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 TOGARAM2Q6ZUX3 1019 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 SIX5Q8N196 739 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 SYNPOQ8N3V7 929 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 ZNF557Q8N988 423 aaPredicted RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 C1orf131Q8NDD1 294 aaKnown RBP10.53□□□□□ -0.72
PFDN5-213ENST00000550964 UBA3Q8TBC4 463 aa10.53□□□□□ -0.72
PFDN5-213ENST00000550964 SH3RF2Q8TEC5 729 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms