RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	SPATA1	Q5VX52	437 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	CENPP	Q6IPU0	288 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	BRSK2	Q8IWQ3	736 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	VPS52	Q8N1B4	723 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	XXYLT1	Q8NBI6	393 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	PIWIL2	Q8TC59	973 aa	Known RBP	5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	CDCA3	Q99618	268 aa	Predicted RBP	5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	TCF25	Q9BQ70	676 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	FAM213A	Q9BRX8	229 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	IKZF4	Q9H2S9	585 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	NSUN3	Q9H649	340 aa	Known RBP	5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	MARCH5	Q9NX47	278 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	RBAK	Q9NYW8	714 aa	Predicted RBP	5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	ADAM28	Q9UKQ2	775 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	SSX2IP	Q9Y2D8	614 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	PRUNE2	Q8WUY3	3088 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	PTPRS	Q13332	1948 aa		5.05	□□□□□ -1.6
ATXN2-222	ENST00000550889	SF3B1	O75533	1304 aa	Known RBP eCLIP	5.04	□□□□□ -1.6	4e-6	■■■■■ 54.5
ATXN2-222	ENST00000550889	ANO9	A1A5B4	782 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CASTOR2	A6NHX0	329 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	WASH4P	A8MWX3	477 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	PIR	O00625	290 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	IKBKB	O14920	756 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CALU	O43852	315 aa	Predicted RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	TADA2A	O75478	443 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	UBOX5	O94941	541 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	MBD3	O95983	291 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	NR3C1	P04150	777 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	RPL13	P26373	211 aa	Known RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	PRCP	P42785	496 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	AARS	P49588	968 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CLCNKB	P51801	687 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	DSG1	Q02413	1049 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	LRRC63	Q05C16	580 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	MORC3	Q14149	939 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	SMC1A	Q14683	1233 aa	Known RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	TMEM132D	Q14C87	1099 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	PSMD6	Q15008	389 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	USP41	Q3LFD5	358 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CDCP2	Q5VXM1	449 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	JADE1	Q6IE81	842 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	FUT10	Q6P4F1	479 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	PDXDC1	Q6P996	788 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CD300LG	Q6UXG3	332 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	TMEM184A	Q6ZMB5	413 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CCDC81	Q6ZN84	652 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	NELFCD	Q8IXH7	590 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	ADSSL1	Q8N142	457 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	DTWD2	Q8NBA8	298 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	BEST2	Q8NFU1	509 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	MAFA	Q8NHW3	353 aa	Predicted RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	MICAL1	Q8TDZ2	1067 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CACTIN	Q8WUQ7	758 aa	Known RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	SAAL1	Q96ER3	474 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	PAAF1	Q9BRP4	392 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	VN1R3	Q9BXE9	311 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	ASPN	Q9BXN1	380 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	ZBP1	Q9H171	429 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	ACBD3	Q9H3P7	528 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CLSTN2	Q9H4D0	955 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CCSER2	Q9H7U1	834 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	CARS2	Q9HA77	564 aa	Known RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	MRPL17	Q9NRX2	175 aa	Known RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	MAN1B1	Q9UKM7	699 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	ADAMTS6	Q9UKP5	1117 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	EFR3B	Q9Y2G0	817 aa		5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	PRG3	Q9Y2Y8	225 aa	Predicted RBP	5.04	□□□□□ -1.6
ATXN2-222	ENST00000550889	VCAN	P13611	3396 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	C2orf71	A6NGG8	1288 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	PODXL	O00592	558 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	PSMA7	O14818	248 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	SYN3	O14994	580 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CLIC2	O15247	247 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	EXOC3	O60645	756 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CXCL14	O95715	111 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	NME1	P15531	152 aa	Known RBP	5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	NR2F2	P24468	414 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	PNPLA4	P41247	253 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	AP3M2	P53677	418 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	LILRA4	P59901	499 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	FKBP3	Q00688	224 aa	Known RBP	5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CREM	Q03060	361 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CYP24A1	Q07973	514 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	STIM1	Q13586	685 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	KCNC3	Q14003	757 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	PTPN14	Q15678	1187 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CAMK4	Q16566	473 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	C9orf57	Q5W0N0	161 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	KIAA1841	Q6NSI8	718 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	RBM43	Q6ZSC3	357 aa	Known RBP	5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	THAP5	Q7Z6K1	395 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	USP37	Q86T82	979 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	PPFIBP1	Q86W92	1011 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	CBWD2	Q8IUF1	395 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	WDR49	Q8IV35	697 aa		5.03	□□□□□ -1.6
ATXN2-222	ENST00000550889	ZC3H3	Q8IXZ2	948 aa	Known RBP	5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms