RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PHOSPHO1Q8TCT1 267 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 DIS3LQ8TF46 1054 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 TRAPPC12Q8WVT3 735 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 PRPF31Q8WWY3 499 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 DNAJC19Q96DA6 116 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 IFT74Q96LB3 600 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 GSDMAQ96QA5 445 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 CTAGE1Q96RT6 745 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 KCNJ15Q99712 375 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 REEP2Q9BRK0 252 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 NFKBIZQ9BYH8 718 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 ST6GALNAC4Q9H4F1 302 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 PARVGQ9HBI0 331 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 XPNPEP1Q9NQW7 623 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 OLFML3Q9NRN5 406 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 RMND1Q9NWS8 449 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 LARSQ9P2J5 1176 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 SUCLA2Q9P2R7 463 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 TRAF6Q9Y4K3 522 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 TCHHQ07283 1943 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 A0A087WWV3 80 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 B4GALT4O60513 344 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 MAFKO60675 156 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 HIP1RO75146 1068 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 LETM1O95202 739 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 LRG1P02750 347 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 SOD2P04179 222 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 COL6A2P12110 1019 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 CRYBB1P53674 252 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 ASIC1P78348 528 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 MRPS6P82932 125 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TLE2Q04725 743 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 LAMTOR4Q0VGL1 99 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 DMP1Q13316 513 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 ADAM9Q13443 819 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 BFSP2Q13515 415 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 DHX8Q14562 1220 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRIM71Q2Q1W2 868 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 ZXDCQ2QGD7 858 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRIM60Q495X7 471 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 ODR4Q5SWX8 454 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 RBM43Q6ZSC3 357 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 STXBP4Q6ZWJ1 553 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 UNC13DQ70J99 1090 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRMT1LQ7Z2T5 733 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 ZNF761Q86XN6 746 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 DAW1Q8N136 415 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 METTL13Q8N6R0 699 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 USP38Q8NB14 1042 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.29□□□□□ -1.48e-6■□□□□ 10.5
SCAF11-213ENST00000550629 HVCN1Q96D96 273 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 DEPDC7Q96QD5 511 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 SH2D3AQ9BRG2 576 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 HTATIP2Q9BUP3 242 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRPV6Q9H1D0 765 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 POLR3FQ9H1D9 316 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 NUP62CLQ9H1M0 184 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 C2orf40Q9H1Z8 148 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 TRMT13Q9NUP7 481 aaKnown RBP6.29□□□□□ -1.4
SCAF11-213ENST00000550629 PANK4Q9NVE7 773 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 SQORQ9Y6N5 450 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 ARID2Q68CP9 1835 aa6.29□□□□□ -1.4
SCAF11-213ENST00000550629 K7ESM1 405 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 M0QZ92 97 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 KIAA0355O15063 1070 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 PRICKLE3O43900 615 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-213ENST00000550629 NOBOXO60393 691 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 PQBP1O60828 265 aaKnown RBP6.28□□□□□ -1.4
SCAF11-213ENST00000550629 RHOBTB3O94955 611 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 KIF20AO95235 890 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 RPN1P04843 607 aaKnown RBP6.28□□□□□ -1.4
SCAF11-213ENST00000550629 CLTBP09497 229 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 GLRA2P23416 452 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 RFC2P35250 354 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 THPOP40225 353 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 PPP1R2P41236 205 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 NPTX2P47972 431 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 CLCN3P51790 818 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 CUL4BQ13620 913 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 CAPSQ13938 189 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 LRRC26Q2I0M4 334 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 COBLL1Q53SF7 1204 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 HERC4Q5GLZ8 1057 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-213ENST00000550629 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 CDCA2Q69YH5 1023 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-213ENST00000550629 DPH6Q7L8W6 267 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 GRAMD1CQ8IYS0 662 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 LRRC71Q8N4P6 559 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 MYCT1Q8N699 235 aa6.28□□□□□ -1.4
SCAF11-213ENST00000550629 DEPTORQ8TB45 409 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms