RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 POSTNQ15063 836 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 SLC9A4Q6AI14 798 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 JMJD6Q6NYC1 403 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-205ENST00000550592 MRGPREQ86SM8 312 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 RASGRP3Q8IV61 690 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 GALNT15Q8N3T1 639 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 OTUD7AQ8TE49 926 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-205ENST00000550592 ASB10Q8WXI3 467 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 RSC1A1Q92681 617 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 PGBD1Q96JS3 809 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 VN1R3Q9BXE9 311 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 TP63Q9H3D4 680 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-205ENST00000550592 NRDE2Q9H7Z3 1164 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 HERC5Q9UII4 1024 aaKnown RBP5.7□□□□□ -1.5
LIMA1-205ENST00000550592 USP22Q9UPT9 525 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 PTPRGP23470 1445 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 BTBD11A6QL63 1104 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 PCDH17O14917 1159 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 SLC16A3O15427 465 aaKnown RBP5.69□□□□□ -1.5
LIMA1-205ENST00000550592 DHHO43323 396 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 ERBB2P04626 1255 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 ITGA2BP08514 1039 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 SRGAP2BP0DMP2 458 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 NTSR1P30989 418 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 ARL4CP56559 192 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 DGCR2P98153 550 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 BIRC3Q13489 604 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 PTPRRQ15256 657 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 ABHD17BQ5VST6 288 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 LIN54Q6MZP7 749 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 MAVSQ7Z434 540 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 SUN3Q8TAQ9 357 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 MYCBPAPQ8TBZ2 947 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 SOCS4Q8WXH5 440 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 GLG1Q92896 1179 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 TRIM63Q969Q1 353 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 EVI5LQ96CN4 794 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 RSPRY1Q96DX4 576 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 WDR24Q96S15 920 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 NUDT22Q9BRQ3 303 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 SERHL2Q9H4I8 314 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 TRIM36Q9NQ86 728 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 SLC2A4RGQ9NR83 387 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 KCTD5Q9NXV2 234 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 ANKFY1Q9P2R3 1169 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 DRG1Q9Y295 367 aaKnown RBP5.69□□□□□ -1.5
LIMA1-205ENST00000550592 TTBK1Q5TCY1 1321 aaPredicted RBP5.69□□□□□ -1.5
LIMA1-205ENST00000550592 ADGRA2Q96PE1 1338 aa5.69□□□□□ -1.5
LIMA1-205ENST00000550592 PTPRTO14522 1441 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 A1L4Q6 167 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 WDR27A2RRH5 827 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 IPO5O00410 1097 aaKnown RBP5.68□□□□□ -1.5
LIMA1-205ENST00000550592 CBFA2T3O75081 653 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 USP1O94782 785 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 ANXA6P08133 673 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 ITGAMP11215 1152 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 RBL1P28749 1068 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 HTR7P34969 479 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 ALDH18A1P54886 795 aaKnown RBP5.68□□□□□ -1.5
LIMA1-205ENST00000550592 TUBA3CQ13748 450 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 CLCA4Q14CN2 919 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 TBCCQ15814 346 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 MIIPQ5JXC2 388 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 LY6G5CQ5SRR4 150 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 TEDDM1Q5T9Z0 273 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 KIAA0895LQ68EN5 471 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 TUBA3EQ6PEY2 450 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 OR1N1Q8NGS0 311 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 FKBP10Q96AY3 582 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 GRAMD1AQ96CP6 724 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 ALG8Q9BVK2 526 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 GLOD4Q9HC38 313 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 CASS4Q9NQ75 786 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 KLC4Q9NSK0 619 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 TESQ9UGI8 421 aaKnown RBP5.68□□□□□ -1.5
LIMA1-205ENST00000550592 RIMKLBQ9ULI2 386 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 SLC27A6Q9Y2P4 619 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 ABCA10Q8WWZ4 1543 aa5.68□□□□□ -1.5
LIMA1-205ENST00000550592 ADAMTS12P58397 1594 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 ABCA5Q8WWZ7 1642 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 MADDQ8WXG6 1647 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 YY2O15391 372 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 ZSCAN9O15535 394 aaPredicted RBP5.67□□□□□ -1.5
LIMA1-205ENST00000550592 DNPH1O43598 174 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 ONECUT2O95948 504 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 RHOP08100 348 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 CD19P15391 556 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 PNLIPRP1P54315 467 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 BLOC1S1P78537 153 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 ACOX1Q15067 660 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 ZNF618Q5T7W0 954 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 FNDC7Q5VTL7 733 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 SULT6B1Q6IMI4 303 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 KCNV1Q6PIU1 500 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 CLEC9AQ6UXN8 241 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 CAND1Q86VP6 1230 aaKnown RBP5.67□□□□□ -1.5
LIMA1-205ENST00000550592 RAB11FIP4Q86YS3 637 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms