RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 HECTD3Q5T447 861 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 IZUMO3Q5VZ72 239 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 ARHGEF26Q96DR7 871 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 SCLYQ96I15 445 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 INTUQ9ULD6 942 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 CAND2O75155 1236 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 ANXA9O76027 345 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 SGPL1O95470 568 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 HSPA4LO95757 839 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 SLC10A3P09131 477 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 PON1P27169 355 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 HADHAP40939 763 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 HABP4Q5JVS0 413 aaKnown RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 TPGS1Q6ZTW0 290 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 TMEM139Q8IV31 216 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 ZBED8Q8IZ13 594 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 GBP7Q8N8V2 638 aaPredicted RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 C11orf84Q9BUA3 381 aaPredicted RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 NFKBIZQ9BYH8 718 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 THEGQ9P2T0 379 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 NUP188Q5SRE5 1749 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 ARVCFO00192 962 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 ALDH1A2O94788 518 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 TMEM253P0C7T8 217 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 RGS4P49798 205 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 PTK7Q13308 1070 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 SYCP2LQ5T4T6 812 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 NAPEPLDQ6IQ20 393 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 CEP68Q76N32 757 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 AMACRQ9UHK6 382 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 FAM187AA6NFU0 413 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 RAD51CO43502 376 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 PTPN1P18031 435 aaKnown RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 POLR2EP19388 210 aaKnown RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 TYK2P29597 1187 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 TIGD7Q6NT04 549 aaPredicted RBP12.64□□□□□ -0.39
NR4A1-215ENST00000550557 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 FBXO10Q9UK96 956 aa12.64□□□□□ -0.39
NR4A1-215ENST00000550557 WDR91A4D1P6 747 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 NDUFS2O75306 463 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 COPS2P61201 443 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 DBN1Q16643 649 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 UGP2Q16851 508 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 TRIM68Q6AZZ1 485 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 PTPRN2Q92932 1015 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ATP13A1Q9HD20 1204 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 SCUBE2Q9NQ36 999 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 TRAF3IP3Q9Y228 551 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 A0A0U1RQJ8 604 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 PHF20L1A8MW92 1017 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 LSM8O95777 96 aaKnown RBP12.63□□□□□ -0.39
NR4A1-215ENST00000550557 RAB30Q15771 203 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
NR4A1-215ENST00000550557 COBLL1Q53SF7 1204 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 C2CD6Q53TS8 623 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ABHD15Q6UXT9 468 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 PARP9Q8IXQ6 854 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ATXN7L3BQ96GX2 97 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 STK39Q9UEW8 545 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 C2orf81A6NN90 581 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 KPNA3O00505 521 aaPredicted RBP12.63□□□□□ -0.39
NR4A1-215ENST00000550557 TSHZ1Q6ZSZ6 1077 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 C1orf186Q6ZWK4 172 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 BLOC1S5Q8TDH9 187 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 HAS1Q92839 578 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ARHGEF38Q9NXL2 777 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ZNF214Q9UL59 606 aaPredicted RBP12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ANKRD63C9JTQ0 380 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 RAMP2O60895 175 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 PYGLP06737 847 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 COMTP21964 271 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 FBXW4P57775 412 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 NUGGCQ68CJ6 796 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 ERAP2Q6P179 960 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
NR4A1-215ENST00000550557 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 RXFP2Q8WXD0 754 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 TATDN2Q93075 761 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 TXLNGQ9NUQ3 528 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 PAK5Q9P286 719 aa12.63□□□□□ -0.39
NR4A1-215ENST00000550557 OR6C75A6NL08 312 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 HSPA1AP0DMV8 641 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 HSPA1BP0DMV9 641 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 GFAPP14136 432 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms