RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 IGDCC3Q8IVU1 814 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 CCDC117Q8IWD4 279 aaPredicted RBP6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 CCDC28AQ8IWP9 274 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 C16orf71Q8IYS4 520 aaPredicted RBP6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 CMTM4Q8IZR5 234 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 ANKRD53Q8N9V6 530 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 DNERQ8NFT8 737 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 SCAMP4Q969E2 229 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 OR10A2Q9H208 303 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 TP63Q9H3D4 680 aaPredicted RBP6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 DKK4Q9UBT3 224 aa6.96□□□□□ -1.3
TGFBR1-208ENST00000550253 SIPA1L3O60292 1781 aaPredicted RBP6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 ARFGEF2Q9Y6D5 1785 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 M0QYG6 137 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 USP1O94782 785 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 HAUS5O94927 633 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 GLP2RO95838 553 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 GLI1P08151 1106 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 HSPA1AP0DMV8 641 aaKnown RBP6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 HSPA1BP0DMV9 641 aaKnown RBP6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 FDXRP22570 491 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 MTHFSP49914 203 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 CPT1AP50416 773 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 WNT3P56703 355 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 AP2B1P63010 937 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 TCF15Q12870 199 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 SLC39A6Q13433 755 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 ARHGEF7Q14155 803 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 NFIXQ14938 502 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 SURF1Q15526 300 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 AMOTQ4VCS5 1084 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 UTP14CQ5TAP6 766 aaKnown RBP6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 Q6ZUG5 572 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 SLC44A2Q8IWA5 706 aaPredicted RBP6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 REXO1L1PQ8IX06 675 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 MZB1Q8WU39 189 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 AFG1LQ8WV93 481 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 CENPIQ92674 756 aaPredicted RBP6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 SDCCAG3Q96C92 435 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 AJUBAQ96IF1 538 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 AFG3L2Q9Y4W6 797 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 COL15A1P39059 1388 aa6.95□□□□□ -1.3
TGFBR1-208ENST00000550253 SLX4Q8IY92 1834 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 LOC102723971A0A1B0GUV8 181 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 GLTPD2A6NH11 291 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 TCERG1O14776 1098 aaKnown RBP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 PJA2O43164 708 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 CCP110O43303 1012 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 AMHP03971 560 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 HSP90AB1P08238 724 aaKnown RBP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 CYP19A1P11511 503 aaPredicted RBP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 HGFACQ04756 655 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 MAPK7Q13164 816 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 MRPL49Q13405 166 aaKnown RBP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 PLEKHO1Q53GL0 409 aaPredicted RBP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 SPATA1Q5VX52 437 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 KRT40Q6A162 431 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 PPP1R32Q7Z5V6 425 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 TMEM151AQ8N4L1 468 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 AOPEPQ8N6M6 819 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 TSPYL6Q8N831 410 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 TMIEQ8NEW7 156 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 ADAMTS18Q8TE60 1221 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 RRP36Q96EU6 259 aaKnown RBP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 RBM15Q96T37 977 aaKnown RBP eCLIP6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 RTKNQ9BST9 563 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 TWSG1Q9GZX9 223 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 GSTO2Q9H4Y5 243 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 FBXO34Q9NWN3 711 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 CA14Q9ULX7 337 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 ZBTB1Q9Y2K1 713 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 BCORQ6W2J9 1755 aa6.94□□□□□ -1.3
TGFBR1-208ENST00000550253 H7C4K7 107 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 PCDH17O14917 1159 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 NTSR2O95665 410 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 CHEK2O96017 543 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 SNRPA1P09661 255 aaKnown RBP6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 ZNF888P0CJ79 500 aaPredicted RBP6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 ATICP31939 592 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 RRADP55042 308 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 VAMP2P63027 116 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 UBE3AQ05086 875 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 DLGAP5Q15398 846 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 SLC45A4Q5BKX6 768 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 FAM160B1Q5W0V3 765 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 GAS2L3Q86XJ1 694 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 RSC1A1Q92681 617 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 RPL10LQ96L21 214 aaKnown RBP6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 PPP1R9BQ96SB3 815 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 GPHA2Q96T91 129 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 MESP1Q9BRJ9 268 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 CHCHD6Q9BRQ6 235 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 PLEKHA5Q9HAU0 1116 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 SEPSECSQ9HD40 501 aaKnown RBP6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 ATP11BQ9Y2G3 1177 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 ADAMTSL1Q8N6G6 1762 aa6.93□□□□□ -1.3
TGFBR1-208ENST00000550253 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
TGFBR1-208ENST00000550253 E9PLN8 166 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms