RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 OVCA2Q8WZ82 227 aa16.35■□□□□ 0.21
RAB5C-205ENST00000550013 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
RAB5C-205ENST00000550013 SDCBP2Q9H190 292 aa16.35■□□□□ 0.21
RAB5C-205ENST00000550013 SLC39A2Q9NP94 309 aa16.35■□□□□ 0.21
RAB5C-205ENST00000550013 GMIPQ9P107 970 aa16.35■□□□□ 0.21
RAB5C-205ENST00000550013 EVLQ9UI08 416 aaPredicted RBP16.35■□□□□ 0.21
RAB5C-205ENST00000550013 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
RAB5C-205ENST00000550013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.34■□□□□ 0.21
RAB5C-205ENST00000550013 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 TRIM24O15164 1050 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 EXOC3O60645 756 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 CUTAO60888 179 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 TULP3O75386 442 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 CLSTN1O94985 981 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 CEACAM1P13688 526 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 CSRP1P21291 193 aaKnown RBP16.34■□□□□ 0.21
RAB5C-205ENST00000550013 MAPK8P45983 427 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 PGFP49763 221 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 SLC5A3P53794 718 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 SNRPFP62306 86 aaKnown RBP16.34■□□□□ 0.21
RAB5C-205ENST00000550013 GAD2Q05329 585 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 BMT2Q1RMZ1 405 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 ZNF699Q32M78 642 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 SNX30Q5VWJ9 437 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 UNQ6494/PRO21346Q6UXR6 183 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 TMEM25Q86YD3 366 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 DMAP1Q9NPF5 467 aaPredicted RBP16.34■□□□□ 0.21
RAB5C-205ENST00000550013 IL37Q9NZH6 218 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 HCN2Q9UL51 889 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 SH3BP1Q9Y3L3 701 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 ATP8B3O60423 1300 aa16.34■□□□□ 0.21
RAB5C-205ENST00000550013 ASPMQ8IZT6 3477 aa16.33■□□□□ 0.21
RAB5C-205ENST00000550013 POLR2DO15514 142 aaKnown RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 HOXC11O43248 304 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 AP1G2O75843 785 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 ZDHHC11BP0C7U3 371 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 WASP42768 502 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 ORC1Q13415 861 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 BIRC3Q13489 604 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 ZNF667Q5HYK9 610 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 FOXD4L5Q5VV16 416 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 LYSMD4Q5XG99 296 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 BTBD8Q5XKL5 378 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 ACOT1Q86TX2 421 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 SYT12Q8IV01 421 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 FUKQ8N0W3 1084 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 DEFB119Q8N690 84 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 ZNF513Q8N8E2 541 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 FOXD4L4Q8WXT5 416 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 OTUB2Q96DC9 234 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 NUSAP1Q9BXS6 441 aaKnown RBP16.33■□□□□ 0.2
RAB5C-205ENST00000550013 VRTNQ9H8Y1 702 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 FSCN3Q9NQT6 498 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 SPHK2Q9NRA0 654 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 KRT82Q9NSB4 513 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 DEC1Q9P2X7 70 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 SPEGQ15772 3267 aa16.33■□□□□ 0.2
RAB5C-205ENST00000550013 LRRIQ3A6PVS8 624 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-205ENST00000550013 BEST1O76090 585 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 VNN1O95497 513 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 YEATS4O95619 227 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 CCDC130P13994 396 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ENGP17813 658 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ITPKAP23677 461 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 AFMP43652 599 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 TUBP50607 506 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 LMAN2Q12907 356 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 CUL4BQ13620 913 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 NCOA4Q13772 614 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ANO4Q32M45 955 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 C10orf76Q5T2E6 689 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ZFYVE26Q68DK2 2539 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 MIB1Q86YT6 1006 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 GRAMD1CQ8IYS0 662 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 TERB1Q8NA31 727 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ZMIZ2Q8NF64 920 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ERLEC1Q96DZ1 483 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 TNIP3Q96KP6 325 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 SMOQ99835 787 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 TMEM121BQ9BXQ6 578 aaPredicted RBP16.32■□□□□ 0.2
RAB5C-205ENST00000550013 HMGXB4Q9UGU5 601 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 PILRBQ9UKJ0 227 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 ZMIZ1Q9ULJ6 1067 aa16.32■□□□□ 0.2
RAB5C-205ENST00000550013 FAM92AA1XBS5 289 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
RAB5C-205ENST00000550013 CFIP05156 583 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 GABRG2P18507 467 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 BYSLQ13895 437 aaKnown RBP16.31■□□□□ 0.2
RAB5C-205ENST00000550013 FOXD4L6Q3SYB3 417 aaPredicted RBP16.31■□□□□ 0.2
RAB5C-205ENST00000550013 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 FOXD4L3Q6VB84 417 aaPredicted RBP16.31■□□□□ 0.2
RAB5C-205ENST00000550013 SCNM1Q9BWG6 230 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 ADAM33Q9BZ11 813 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 NACA2Q9H009 215 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 MAGEF1Q9HAY2 307 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms