RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SLC6A11P48066 632 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 MCCD1P59942 119 aaPredicted RBP17.25■□□□□ 0.35
VPS29-207ENST00000549970 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
VPS29-207ENST00000549970 DMC1Q14565 340 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 RSPO4Q2I0M5 234 aaPredicted RBP17.25■□□□□ 0.35
VPS29-207ENST00000549970 COBLL1Q53SF7 1204 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 PPP1R26Q5T8A7 1209 aaPredicted RBP17.25■□□□□ 0.35
VPS29-207ENST00000549970 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 ISM2Q6H9L7 571 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 RHBDF2Q6PJF5 856 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 SYT13Q7L8C5 426 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 CAMKK1Q8N5S9 505 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 SPATA20Q8TB22 786 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 ACDQ96AP0 544 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 TIGD1Q96MW7 591 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 ARID3AQ99856 593 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 DNAI2Q9GZS0 605 aa17.25■□□□□ 0.35
VPS29-207ENST00000549970 CCDC163A0A0D9SF12 145 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 ANTXRLA6NF34 631 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 K7EQS6 105 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 SLC16A3O15427 465 aaKnown RBP17.24■□□□□ 0.35
VPS29-207ENST00000549970 RPP40O75818 363 aaKnown RBP17.24■□□□□ 0.35
VPS29-207ENST00000549970 TBX18O95935 607 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 ADH5P11766 374 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 CBWD6Q4V339 395 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 C2orf27AQ580R0 203 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 CBWD3Q5JTY5 395 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 CBWD5Q5RIA9 395 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 LY6G5CQ5SRR4 150 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 ERMP1Q7Z2K6 904 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 C12orf40Q86WS4 652 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 BBS7Q8IWZ6 715 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 ZC3H3Q8IXZ2 948 aaKnown RBP17.24■□□□□ 0.35
VPS29-207ENST00000549970 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
VPS29-207ENST00000549970 CCDC26Q8TAB7 109 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 GAB3Q8WWW8 586 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 TATDN2Q93075 761 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 WBP2Q969T9 261 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 HEXIM2Q96MH2 286 aaKnown RBP17.24■□□□□ 0.35
VPS29-207ENST00000549970 CISHQ9NSE2 258 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 SCML2Q9UQR0 700 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 RALGAPA1Q6GYQ0 2036 aa17.24■□□□□ 0.35
VPS29-207ENST00000549970 SPAG17Q6Q759 2223 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 EML5Q05BV3 1969 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 AXIN1O15169 862 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 LMNB2Q03252 620 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 LRRC63Q05C16 580 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 KDSRQ06136 332 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 MESP2Q0VG99 397 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 PUM1Q14671 1186 aaKnown RBP eCLIP17.23■□□□□ 0.35
VPS29-207ENST00000549970 DGLUCYQ7Z3D6 616 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 SFTPA1Q8IWL2 248 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 USP33Q8TEY7 942 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 OTUB2Q96DC9 234 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 PNKPQ96T60 521 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 DUSP16Q9BY84 665 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 NMUR1Q9HB89 426 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 PNPLA8Q9NP80 782 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 OSER1Q9NX31 292 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 DLL3Q9NYJ7 618 aa17.23■□□□□ 0.35
VPS29-207ENST00000549970 A0A1W2PQH9 124 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 PSMA7O14818 248 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 KAT7O95251 611 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 APBB3O95704 486 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 APODP05090 189 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 ATP5C1P36542 298 aaKnown RBP17.22■□□□□ 0.35
VPS29-207ENST00000549970 EIF2DP41214 584 aaKnown RBP17.22■□□□□ 0.35
VPS29-207ENST00000549970 KIF11P52732 1056 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 FOXK2Q01167 660 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 GAD2Q05329 585 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 STIM1Q13586 685 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 KBTBD6Q86V97 674 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 TTC39CQ8N584 583 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 CCDC33Q8N5R6 958 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 NAT16Q8N8M0 369 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 SLC4A11Q8NBS3 891 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 TMEM176AQ96HP8 235 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 FAXDC2Q96IV6 333 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
VPS29-207ENST00000549970 CYLDQ9NQC7 956 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 ARHGEF4Q9NR80 690 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 SEMA4GQ9NTN9 838 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 ARMCX3Q9UH62 379 aaPredicted RBP17.22■□□□□ 0.35
VPS29-207ENST00000549970 NUDT5Q9UKK9 219 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 MAN1B1Q9UKM7 699 aa17.22■□□□□ 0.35
VPS29-207ENST00000549970 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.22■□□□□ 0.35
VPS29-207ENST00000549970 PRR5-ARHGAP8B1AHC4 643 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 MDM4O15151 490 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 RARGP13631 454 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 RAD23BP54727 409 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 ANO4Q32M45 955 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 KLHL10Q6JEL2 608 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 CACNA2D4Q7Z3S7 1137 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 TSTD1Q8NFU3 115 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 KLF16Q9BXK1 252 aaPredicted RBP17.21■□□□□ 0.35
VPS29-207ENST00000549970 NAGPAQ9UK23 515 aa17.21■□□□□ 0.35
VPS29-207ENST00000549970 CDV3Q9UKY7 258 aaKnown RBP17.21■□□□□ 0.35
VPS29-207ENST00000549970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms