RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 PPM1HQ9ULR3 514 aa13.3□□□□□ -0.28
CALCOCO1-217ENST00000549935 MYH9P35579 1960 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 A0A088AWK7 358 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 K7ERI5 159 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 BIRC5O15392 142 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 CCNT2O60583 730 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 ELK3P41970 407 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 CPA2P48052 419 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 CLCN2P51788 898 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 SLC25A11Q02978 314 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 IGDCC3Q8IVU1 814 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 DEPTORQ8TB45 409 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 FNIP1Q8TF40 1166 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 UBE2OQ9C0C9 1292 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 IQCGQ9H095 443 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 STN1Q9H668 368 aaKnown RBP13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 FBXO40Q9UH90 709 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 SOX13Q9UN79 622 aa13.29□□□□□ -0.28
CALCOCO1-217ENST00000549935 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 ATP9BO43861 1147 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CST8O60676 142 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 PIAS1O75925 651 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 KRT37O76014 449 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 SNRPAP09012 282 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 UQCRBP14927 111 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 NCOA4Q13772 614 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 ITGA9Q13797 1035 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 DPYSL3Q14195 570 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 MAP3K21Q5TCX8 1036 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 LGSNQ5TDP6 509 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CDHR3Q6ZTQ4 885 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 DHDDSQ86SQ9 333 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 TMEM35BQ8NCS4 154 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 NAT14Q8WUY8 206 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 JADE3Q92613 823 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 LBHD1Q9BQE6 289 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 AGTPBP1Q9UPW5 1226 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 COL11A1P12107 1806 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 SDR42E2A6NKP2 422 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 KBTBD13C9JR72 458 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CHADO15335 359 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 PEX1O43933 1283 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 EDN1P05305 212 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 EIF4BP23588 611 aaKnown RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 TMPRSS15P98073 1019 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 SP2Q02086 613 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 BTKQ06187 659 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 MED21Q13503 144 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZNF394Q53GI3 561 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 EFHC1Q5JVL4 640 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 SLFN12LQ6IEE8 588 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 ARCQ7LC44 396 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CRLF3Q8IUI8 442 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 ARID3BQ8IVW6 561 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 TTC1Q99614 292 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
CALCOCO1-217ENST00000549935 CNTNAP2Q9UHC6 1331 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 APOC4-APOC2K7ER74 178 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 BAG2O95816 211 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 PIGRP01833 764 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 APOC2P02655 101 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 KDELR1P24390 212 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 PRKCHP24723 683 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 KDSRQ06136 332 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 TNFAIP1Q13829 316 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 KCNJ11Q14654 390 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 RFX8Q6ZV50 586 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 RAPH1Q70E73 1250 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 RASSF3Q86WH2 238 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 UNC45BQ8IWX7 931 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 CDHR1Q96JP9 859 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 CLPTM1LQ96KA5 538 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 ACAP3Q96P50 834 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 BTBD9Q96Q07 612 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 IMPG2Q9BZV3 1241 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 PORCNQ9H237 461 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 HBS1LQ9Y450 684 aaKnown RBP13.27□□□□□ -0.28
CALCOCO1-217ENST00000549935 PARP14Q460N5 1801 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 A0A0B4J269 797 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 CASQ2O14958 399 aaPredicted RBP13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 LDHAP00338 332 aaKnown RBP13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 NAMPTP43490 491 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 AQP5P55064 265 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 BACE1P56817 501 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 MRPS5P82675 430 aaKnown RBP13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 HIC1Q14526 733 aa13.27□□□□□ -0.29
CALCOCO1-217ENST00000549935 HADHQ16836 314 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms