RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 PIP4K2CQ8TBX8 421 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 FOXJ1Q92949 421 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 MRGPRX1Q96LB2 322 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 CEP295NLQ96MC4 621 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 SYT15Q9BQS2 421 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 TM7SF3Q9NS93 570 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 CDH9Q9ULB4 789 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 STARD13Q9Y3M8 1113 aa11.51□□□□□ -0.57
TRAFD1-206ENST00000549358 MEI4A8MW99 385 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 F8VP50 259 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 TRIM66O15016 1216 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 HOXC11O43248 304 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 CILPO75339 1184 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 CAMK2BQ13554 666 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 MCM6Q14566 821 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 POSTNQ15063 836 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 MAPRE1Q15691 268 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 HLA-BQ31612 363 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 GALNT15Q8N3T1 639 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 ZCCHC9Q8N567 271 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 KBTBD7Q8WVZ9 684 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 OTUB2Q96DC9 234 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 SAAL1Q96ER3 474 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 PCED1BQ96HM7 432 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 C8orf48Q96LL4 319 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 SLITRK1Q96PX8 696 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 CDC6Q99741 560 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 CD248Q9HCU0 757 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 SPHK2Q9NRA0 654 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 RBAKQ9NYW8 714 aaPredicted RBP11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 ITGA11Q9UKX5 1188 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 LIMCH1Q9UPQ0 1083 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 SH3BP1Q9Y3L3 701 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 R3HCC1Q9Y3T6 440 aaKnown RBP11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 TCHHQ07283 1943 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
TRAFD1-206ENST00000549358 CACNA1EQ15878 2313 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 TK2O00142 265 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 COCHO43405 550 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 CD6P30203 668 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 UBA7P41226 1012 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 MATKP42679 507 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 ABCG1P45844 678 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 HMGN5P82970 282 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 KCNA1Q09470 495 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 MYO1EQ12965 1108 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 KIAA1324Q6UXG2 1013 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 DPH6Q7L8W6 267 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 BAHD1Q8TBE0 780 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 NOC3LQ8WTT2 800 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 DNASE2BQ8WZ79 361 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 TOE1Q96GM8 510 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 ZFRQ96KR1 1074 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 KIF2CQ99661 725 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 GABRG3Q99928 467 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 GPR174Q9BXC1 333 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 ST6GALNAC4Q9H4F1 302 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 BLOC1S4Q9NUP1 217 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 DNAJC17Q9NVM6 304 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 CHORDC1Q9UHD1 332 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 SIX4Q9UIU6 781 aa11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 FNDC3AQ9Y2H6 1198 aaKnown RBP11.49□□□□□ -0.57
TRAFD1-206ENST00000549358 HELZP42694 1942 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 ANAPC1Q9H1A4 1944 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 GOLGA8IPA6NC78 632 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 GOLGA8JA6NMD2 632 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 WASH3PC4AMC7 463 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 PRRT4C9JH25 899 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 ATXN7O15265 892 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 BCAT2O15382 392 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 DKK1O94907 266 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 CER1O95813 267 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 ZNF883P0CG24 379 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 NCAM1P13591 858 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 ITPKBP27987 946 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 CACNA2D1P54289 1103 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 BNC1Q01954 994 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 CCDC157Q569K6 752 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 RILPL1Q5EBL4 403 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 MDH1BQ5I0G3 518 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 IL27RAQ6UWB1 636 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 DBX2Q6ZNG2 339 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 BRSK2Q8IWQ3 736 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 SCFD1Q8WVM8 642 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 RAD54LQ92698 747 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 MMS19Q96T76 1030 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 MTMR12Q9C0I1 747 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 WSB2Q9NYS7 404 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms