RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 CNNM4Q6P4Q7 775 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 FAM43BQ6ZT52 329 aaPredicted RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 TAS1R1Q7RTX1 841 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ERMP1Q7Z2K6 904 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 LRRC56Q8IYG6 542 aaPredicted RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 KIAA0895Q8NCT3 520 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 FAM13CQ8NE31 585 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 GSTCDQ8NEC7 633 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 SCFD1Q8WVM8 642 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 P2RX5Q93086 422 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 CCDC120Q96HB5 630 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 CRELD1Q96HD1 420 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 KREMEN1Q96MU8 473 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ZMAT2Q96NC0 199 aaKnown RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 COLEC11Q9BWP8 271 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ST6GALNAC4Q9H4F1 302 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 TMEM206Q9H813 350 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 MARCH5Q9NX47 278 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 CLDND1Q9NY35 253 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 HOOK1Q9UJC3 728 aaKnown RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ADAM28Q9UKQ2 775 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 NOTCH4Q99466 2003 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 HELZP42694 1942 aaKnown RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 MIA3Q5JRA6 1907 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 UBE4BO95155 1302 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 FAM237AA0A1B0GTK4 181 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 MYOCOSA0A1B0GUC4 107 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 GOLGA6L22H0YM25 854 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 ETV2O00321 342 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PODXLO00592 558 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 EIF3DO15371 548 aaKnown RBP eCLIP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 MEFVO15553 781 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 B3GAT3O94766 335 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 HTR3BO95264 441 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 SMC2O95347 1197 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PIGRP01833 764 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 URODP06132 367 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 KRT19P08727 400 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 DLATP10515 647 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 RPL17P18621 184 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 SCP2P22307 547 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 GLDCP23378 1020 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 IGFBP6P24592 240 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 ADSSP30520 456 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 MCM4P33991 863 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 HOXD13P35453 343 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 NDUFV1P49821 464 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 CDR1P51861 262 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 TFF2Q03403 129 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 DSC1Q08554 894 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 CAMK1Q14012 370 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 SMC1AQ14683 1233 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 BMS1Q14692 1282 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 TMEM132DQ14C87 1099 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 KNOP1Q1ED39 458 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 FAM171A1Q5VUB5 890 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 KLHL10Q6JEL2 608 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 FUT10Q6P4F1 479 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PRSS55Q6UWB4 352 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 EPM2AIP1Q7L775 607 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 HS2ST1Q7LGA3 356 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 CBWD2Q8IUF1 395 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 GPD1LQ8N335 351 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PDZD8Q8NEN9 1154 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 RIN2Q8WYP3 895 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 CCDC127Q96BQ5 260 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 EEF2KMTQ96G04 330 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PPP1R10Q96QC0 940 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 TMEM175Q9BSA9 504 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 STRA6Q9BX79 667 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 VN1R3Q9BXE9 311 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 LMAN2LQ9H0V9 348 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 TLE6Q9H808 572 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 MMRN2Q9H8L6 949 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PDE11AQ9HCR9 933 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 AGPAT3Q9NRZ7 376 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 SLC38A7Q9NVC3 462 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 RMND1Q9NWS8 449 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 RBAKQ9NYW8 714 aaPredicted RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 HSPBP1Q9NZL4 362 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 CPSF3Q9UKF6 684 aaKnown RBP6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 NUB1Q9Y5A7 615 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 PCDHA5Q9Y5H7 936 aa6.34□□□□□ -1.39
EFCAB2-215ENST00000549220 NCOR1O75376 2440 aa6.34□□□□□ -1.4
EFCAB2-215ENST00000549220 UNC80Q8N2C7 3258 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 SF3B1O75533 1304 aaKnown RBP eCLIP6.33□□□□□ -1.46e-6■■■■■ 103.4
EFCAB2-215ENST00000549220 TTC26A0AVF1 554 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 H3BQ06 376 aaPredicted RBP6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 SCAMP3O14828 347 aaKnown RBP6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 PPEF2O14830 753 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 TGFB1I1O43294 461 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 XPOTO43592 962 aaKnown RBP6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 CALUO43852 315 aaPredicted RBP6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 EXTL3O43909 919 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 FAM189A1O60320 539 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 GREM1O60565 184 aa6.33□□□□□ -1.4
EFCAB2-215ENST00000549220 EXOC3O60645 756 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms