RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 C8orf34Q49A92 452 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 CFAP221Q4G0U5 840 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 PREPLQ4J6C6 727 aaPredicted RBP9.04□□□□□ -0.96
TROAP-208ENST00000548817 TAF1BQ53T94 588 aaPredicted RBP9.04□□□□□ -0.96
TROAP-208ENST00000548817 WDR45BQ5MNZ6 344 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 IL27RAQ6UWB1 636 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 VSTM1Q6UX27 236 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 DBX2Q6ZNG2 339 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 TMPRSS12Q86WS5 348 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 CCDC65Q8IXS2 484 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 PGBD3Q8N328 593 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 ARL14EPQ8N8R7 260 aaPredicted RBP9.04□□□□□ -0.96
TROAP-208ENST00000548817 TXNDC5Q8NBS9 432 aaKnown RBP9.04□□□□□ -0.96
TROAP-208ENST00000548817 STKLD1Q8NE28 680 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 ENGASEQ8NFI3 743 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 RIN3Q8TB24 985 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 SH3RF2Q8TEC5 729 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 LRRC15Q8TF66 581 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 HMGB4Q8WW32 186 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 FOXJ1Q92949 421 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 HPDLQ96IR7 371 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 MYRFLQ96LU7 910 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 HSPA12BQ96MM6 686 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 MMS19Q96T76 1030 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 SYT15Q9BQS2 421 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 PANK2Q9BZ23 570 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 IKZF4Q9H2S9 585 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 SNX25Q9H3E2 840 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 PDE11AQ9HCR9 933 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 PANK4Q9NVE7 773 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 CDH9Q9ULB4 789 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 SRPRBQ9Y5M8 271 aaKnown RBP9.04□□□□□ -0.96
TROAP-208ENST00000548817 WNT6Q9Y6F9 365 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 LRRK2Q5S007 2527 aa9.04□□□□□ -0.96
TROAP-208ENST00000548817 FLNCQ14315 2725 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 A0A0A0MRY4 1105 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 TCRBV21S2A2A0A5A6 115 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 TRIM66O15016 1216 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 PPP1R37O75864 691 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 PRPF6O94906 941 aaKnown RBP9.03□□□□□ -0.96
TROAP-208ENST00000548817 CLSTN1O94985 981 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 ABL1P00519 1130 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 PDGFRBP09619 1106 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 CHRM1P11229 460 aaPredicted RBP9.03□□□□□ -0.96
TROAP-208ENST00000548817 CDK4P11802 303 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 C6P13671 934 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 PFKLP17858 780 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 PPP3CCP48454 512 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 CYP27A1Q02318 531 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 CEBPZQ03701 1054 aaKnown RBP9.03□□□□□ -0.96
TROAP-208ENST00000548817 KCNA1Q09470 495 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 DENND5BQ6ZUT9 1274 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 TRMT11Q7Z4G4 463 aaKnown RBP9.03□□□□□ -0.96
TROAP-208ENST00000548817 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 TRIML1Q8N9V2 468 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 DNAJC19Q96DA6 116 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 ZNF419Q96HQ0 510 aaPredicted RBP9.03□□□□□ -0.96
TROAP-208ENST00000548817 CEP295NLQ96MC4 621 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 STRA6Q9BX79 667 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 MTMR12Q9C0I1 747 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 KIAA1586Q9HCI6 787 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 OLFML3Q9NRN5 406 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 TM7SF3Q9NS93 570 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 INTS13Q9NVM9 706 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
TROAP-208ENST00000548817 NOTCH2Q04721 2471 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 IGHV1OR15-9A0A0B4J2B8 117 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 A0A1B0GTW7 788 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 C2orf78A6NCI8 922 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 GABRDO14764 452 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 ZBTB24O43167 697 aaPredicted RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 TNFSF14O43557 240 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 TLX3O43711 291 aaPredicted RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 APODP05090 189 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 BDNFP23560 247 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 GNL1P36915 607 aaPredicted RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 MATKP42679 507 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 TNFRSF4P43489 277 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 KIR2DL1P43626 348 aaPredicted RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 AMPD3Q01432 767 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 SUZ12Q15022 739 aaKnown RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 PTPRNQ16849 979 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 SOWAHAQ2M3V2 549 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 PKDCCQ504Y2 493 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 TDRD10Q5VZ19 366 aaKnown RBP9.02□□□□□ -0.97
TROAP-208ENST00000548817 FAM171BQ6P995 826 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 NUDT18Q6ZVK8 323 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 OSTM1Q86WC4 334 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.97
TROAP-208ENST00000548817 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 SPRYD3Q8NCJ5 442 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 ZSWIM2Q8NEG5 633 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 RHBDD1Q8TEB9 315 aa9.02□□□□□ -0.97
TROAP-208ENST00000548817 MYLPFQ96A32 169 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms