RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 AMPD1P23109 780 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 MAGEA6P43360 314 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 ACTR3P61158 418 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 MRPS5P82675 430 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 SARNPP82979 210 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 TMPRSS15P98073 1019 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 CNTN2Q02246 1040 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 RBBP5Q15291 538 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 TAF5Q15542 800 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 TEX44Q53QW1 395 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 SCARA5Q6ZMJ2 495 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 ZBTB33Q86T24 672 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 MYLK4Q86YV6 388 aaPredicted RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 TREML1Q86YW5 311 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 SCUBE1Q8IWY4 988 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 CTAGE3PQ8IX95 158 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 RBM15BQ8NDT2 890 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 LRRC39Q96DD0 335 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 ZBTB10Q96DT7 871 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 USP29Q9HBJ7 922 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 POPDC2Q9HBU9 364 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 GPAMQ9HCL2 828 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 NRBP2Q9NSY0 501 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 PDP2Q9P2J9 529 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 PPARGC1AQ9UBK2 798 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 SORCS3Q9UPU3 1222 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 C2CD2Q9Y426 696 aa10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 COL11A1P12107 1806 aaPredicted RBP10.27□□□□□ -0.76
SMARCD1-205ENST00000548573 BIRC5O15392 142 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 B4GALT4O60513 344 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 SNNO75324 88 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 MAFO75444 373 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 KRT38O76015 456 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 TNNC2P02585 160 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 ENO1P06733 434 aaKnown RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 ANPEPP15144 967 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 ZNF143P52747 638 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 CACNA2D1P54289 1103 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 NRLP54845 237 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 BACE1P56817 501 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 AP2B1P63010 937 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 TFAMQ00059 246 aaKnown RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 TNFAIP1Q13829 316 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 DBN1Q16643 649 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 RNF220Q5VTB9 566 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 AP1ARQ63HQ0 302 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 NPNTQ6UXI9 565 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 KYAT3Q6YP21 454 aaKnown RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 CRLF3Q8IUI8 442 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 NUDCD3Q8IVD9 361 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 ARID3BQ8IVW6 561 aaPredicted RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 CEP120Q8N960 986 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 CFAP36Q96G28 342 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 SIKE1Q9BRV8 207 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 CCDC28BQ9BUN5 200 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 CCDC106Q9BWC9 280 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 BCO2Q9BYV7 579 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 VPS33BQ9H267 617 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 ACAD9Q9H845 621 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 QTRT2Q9H974 415 aaKnown RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 RAB6BQ9NRW1 208 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 ZC3H7BQ9UGR2 993 aaKnown RBP10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 WASF2Q9Y6W5 498 aa10.27□□□□□ -0.77
SMARCD1-205ENST00000548573 RLFQ13129 1914 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 H7C0C1 242 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 MAP3K13O43283 966 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 AVILO75366 819 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 SNUPNO95149 360 aaKnown RBP10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 SERPINA6P08185 405 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 OSBPP22059 807 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 CRHR1P34998 444 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 ATP5OP48047 213 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 CPA2P48052 419 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 GCLCP48506 637 aaPredicted RBP10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 CDH6P55285 790 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 WASHC5Q12768 1159 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 CHI3L2Q15782 390 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 STXBP2Q15833 593 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 RIPOR1Q6ZS17 1223 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 ILDR2Q71H61 639 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 ARCQ7LC44 396 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 KBTBD2Q8IY47 623 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 ULK2Q8IYT8 1036 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 MCUQ8NE86 351 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 PRPF31Q8WWY3 499 aaKnown RBP10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 ANKRD36BP1Q96IX9 119 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 ACAP3Q96P50 834 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 RNF157Q96PX1 679 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 PANX3Q96QZ0 392 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 MECRQ9BV79 373 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 KLC2Q9H0B6 622 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 SDCBP2Q9H190 292 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 MYOZ2Q9NPC6 264 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 CXorf49A8MYA2 514 aaPredicted RBP10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 FKBP6O75344 327 aa10.26□□□□□ -0.77
SMARCD1-205ENST00000548573 APOEP02649 317 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms