RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 GABRG2P18507 467 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 PGFP49763 221 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 FAM193AP78312 1265 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 CYP24A1Q07973 514 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 BIRC3Q13489 604 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 BYSLQ13895 437 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 COL9A2Q14055 689 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 PSMD6Q15008 389 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 FOXD4L6Q3SYB3 417 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 FOXD4L3Q6VB84 417 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 ACOT1Q86TX2 421 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 MIB1Q86YT6 1006 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 PHTF2Q8N3S3 785 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 HDDC3Q8N4P3 179 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 XXYLT1Q8NBI6 393 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 JAKMIP2Q96AA8 810 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 CEP295NLQ96MC4 621 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 ACOX2Q99424 681 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 TRIM9Q9C026 710 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC6A17Q9H1V8 727 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.68□□□□□ -0.381e-7■■■■■ 115.4
TRAFD1-205ENST00000548277 SPHK2Q9NRA0 654 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 DEC1Q9P2X7 70 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 PILRBQ9UKJ0 227 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 CYP8B1Q9UNU6 501 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
TRAFD1-205ENST00000548277 PLXNB3Q9ULL4 1909 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 SRRM3A6NNA2 597 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 NEDD8-MDP1E9PL57 170 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 AP5Z1O43299 807 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 AP1G2O75843 785 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 BEST1O76090 585 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 TBX18O95935 607 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 HOXB2P14652 356 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC5A3P53794 718 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 AMPD3Q01432 767 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 DUOXA1Q1HG43 343 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 HSF5Q4G112 596 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 FAM26FQ5R3K3 315 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC23A3Q6PIS1 610 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 FAM35AQ86V20 835 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 RGL4Q8IZJ4 473 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 CHCHD4Q8N4Q1 142 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 KDF1Q8NAX2 398 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 PDZD8Q8NEN9 1154 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 GATA6Q92908 595 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 BHMTQ93088 406 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 LRRC27Q9C0I9 530 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 SDCBP2Q9H190 292 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC39A2Q9NP94 309 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 DNAJC17Q9NVM6 304 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 CALCOCO1Q9P1Z2 691 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 NUDT5Q9UKK9 219 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 HCN2Q9UL51 889 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC6A14Q9UN76 642 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 RAD54BQ9Y620 910 aa12.67□□□□□ -0.38
TRAFD1-205ENST00000548277 WASH3PC4AMC7 463 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 ZBTB24O43167 697 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 STX6O43752 255 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 EXOC3O60645 756 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 OPHN1O60890 802 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 CCDC130P13994 396 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 MAOBP27338 520 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 NTSR1P30989 418 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 AFMP43652 599 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 MAP3K7CLP57077 242 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 E2F4Q16254 413 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 ZNF667Q5HYK9 610 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 EPM2AIP1Q7L775 607 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 SLC41A1Q8IVJ1 513 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 ETFBKMTQ8IXQ9 262 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 MINDY1Q8N5J2 469 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 SYAP1Q96A49 352 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 CAMK1GQ96NX5 476 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 GZF1Q9H116 711 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 PLK2Q9NYY3 685 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
TRAFD1-205ENST00000548277 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 PTPRBP23467 1997 aa12.65□□□□□ -0.38
TRAFD1-205ENST00000548277 FRYQ5TBA9 3013 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms