RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 TJP3O95049 919 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 RTN3O95197 1032 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 GJB5O95377 273 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 URODP06132 367 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 CYP2F1P24903 491 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 CHRNA3P32297 505 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 SULT1E1P49888 294 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 RPL10AP62906 217 aaKnown RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 ATP11AP98196 1134 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 DHX34Q14147 1143 aaKnown RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 NAA30Q147X3 362 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 PDK2Q15119 407 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 C15orf59Q2T9L4 293 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 TFDP3Q5H9I0 405 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 SLC8B1Q6J4K2 584 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 TRNP1Q6NT89 227 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 SPOCD1Q6ZMY3 1216 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 GPRIN1Q7Z2K8 1008 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 DDX53Q86TM3 631 aaKnown RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 TMEM173Q86WV6 379 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 DEFB106AQ8N104 65 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 ARHGAP18Q8N392 663 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 FIBCD1Q8N539 461 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 C12orf50Q8NA57 414 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 PHOSPHO2Q8TCD6 241 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 RIN2Q8WYP3 895 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 KRT12Q99456 494 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 LBHD1Q9BQE6 289 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 C11orf84Q9BUA3 381 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 AP1M1Q9BXS5 423 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 ANKZF1Q9H8Y5 726 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 TMEM30AQ9NV96 361 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 RASAL2Q9UJF2 1139 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 INSL6Q9Y581 213 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 USP3Q9Y6I4 520 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
RAB5B-204ENST00000548068 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 ZNF487B1APH4 448 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 MDM4O15151 490 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 F9P00740 461 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 USP17L7P0C7H9 530 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 RALAP11233 206 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 TCF4P15884 667 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 FNTAP49354 379 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 NDUFV1P49821 464 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 SLC5A3P53794 718 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 AIF1P55008 147 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 ARPP19P56211 112 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 DSG1Q02413 1049 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 KRT17Q04695 432 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 BRD3Q15059 726 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 CYP1B1Q16678 543 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 DCAF6Q58WW2 860 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 TMEM240Q5SV17 173 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 AADACL2Q6P093 401 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 WDR93Q6P2C0 686 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 SCYL2Q6P3W7 929 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAB5B-204ENST00000548068 C16orf59Q7L2K0 433 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 PSTKQ8IV42 348 aaKnown RBP12.92□□□□□ -0.34
RAB5B-204ENST00000548068 KLHL7Q8IXQ5 586 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 KCTD6Q8NC69 237 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
RAB5B-204ENST00000548068 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
RAB5B-204ENST00000548068 SPATA17Q96L03 361 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 NPY6RQ99463 290 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 FRMD8P1Q9BZ68 369 aaPredicted RBP12.92□□□□□ -0.34
RAB5B-204ENST00000548068 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAB5B-204ENST00000548068 STIM2Q9P246 746 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 HSFX1Q9UBD0 423 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 CDY1Q9Y6F8 540 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
RAB5B-204ENST00000548068 hCG_1818297A0A087WSY0 165 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 FAM187AA6NFU0 413 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 YJEFN3A6XGL0 299 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 E7ENQ6 273 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 PI4K2BG5E9Z4 385 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 TNFRSF10BO14763 440 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 ENDOD1O94919 500 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 RARAP10276 462 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 HAPLN1P10915 354 aaPredicted RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 KDELR1P24390 212 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 IL1R2P27930 398 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 RDXP35241 583 aaKnown RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 CDKN2BP42772 138 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 TUFMP49411 452 aaKnown RBP12.91□□□□□ -0.34
RAB5B-204ENST00000548068 HDAC4P56524 1084 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
RAB5B-204ENST00000548068 KRT81Q14533 505 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms