RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PCDHA1Q9Y5I3 950 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 COL3A1P02461 1466 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 LMTK3Q96Q04 1460 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 SMARCA2P51531 1590 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 NESP48681 1621 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 TRGV11A0A075B6L2 103 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 A6NLC8 198 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 F2RL2O00254 374 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 SOAT2O75908 522 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 HAUS5O94927 633 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 MYL4P12829 197 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 ALAS1P13196 640 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 MALP21145 153 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 KCNJ5P48544 419 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 TOB1P50616 345 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 CLNS1AP54105 237 aaKnown RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 GEN1Q17RS7 908 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 CCDC96Q2M329 555 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 ITPRIPL1Q6GPH6 555 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 JMJD6Q6NYC1 403 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 ZNF365Q70YC5 407 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 C2CD5Q86YS7 1000 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 TMTC1Q8IUR5 882 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 CELF5Q8N6W0 485 aaKnown RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 CCDC150Q8NCX0 1101 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 FAM71BQ8TC56 605 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 KBTBD7Q8WVZ9 684 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 IPCEF1Q8WWN9 437 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 NMD3Q96D46 503 aaKnown RBP4.85□□□□□ -1.63
SCAF11-210ENST00000547654 SNX22Q96L94 193 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 MED15Q96RN5 788 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 PNKPQ96T60 521 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 BRD9Q9H8M2 597 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 RIC8AQ9NPQ8 531 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 GJB4Q9NTQ9 266 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 COL20A1Q9P218 1284 aa4.85□□□□□ -1.63
SCAF11-210ENST00000547654 SETD1BQ9UPS6 1966 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 WDR27A2RRH5 827 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 WDR91A4D1P6 747 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 AQP12BA6NM10 295 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 B4E171 279 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 IPO5O00410 1097 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 TBC1D4O60343 1298 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 SUN1O94901 812 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 AGFG2O95081 481 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 TBX18O95935 607 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 ELFN1P0C7U0 828 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 IDEP14735 1019 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 GATA3P23771 443 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 TSPAN7P41732 249 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 LIFRP42702 1097 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 CREMQ03060 361 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 EZH2Q15910 746 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 SPATA1Q5VX52 437 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 KIAA1614Q5VZ46 1190 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 RNF44Q7L0R7 432 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 FASTKD5Q7L8L6 764 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 HEATR4Q86WZ0 1026 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 OR8H2Q8N162 312 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 C9orf106Q8NAJ2 232 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 IPO4Q8TEX9 1081 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 UCMAQ8WVF2 138 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 ASB12Q8WXK4 309 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 SARAFQ96BY9 339 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 LRRC46Q96FV0 321 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 MRGPRX1Q96LB2 322 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 P2RX7Q99572 595 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 TRIM54Q9BYV2 358 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 PLEKHA5Q9HAU0 1116 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 SAYSD1Q9NPB0 183 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 MRPS18AQ9NVS2 196 aaKnown RBP4.84□□□□□ -1.63
SCAF11-210ENST00000547654 KIF17Q9P2E2 1029 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 ITGB1BP2Q9UKP3 347 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 TTLL3Q9Y4R7 772 aa4.84□□□□□ -1.63
SCAF11-210ENST00000547654 ERCC6L2Q5T890 1561 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 FAM234BA2RU67 622 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 MANSC4A6NHS7 340 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 ANP32CO43423 234 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 DDX58O95786 925 aaKnown RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 MT-ND5P03915 603 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 RPS6KB1P23443 525 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 CARSP49589 748 aaKnown RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 SOX8P57073 446 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 POU6F2P78424 691 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 HTRA4P83105 476 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 SLC13A2Q13183 592 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 TRPC3Q13507 836 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 RAB32Q13637 225 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 PTK2BQ14289 1009 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 RAB30Q15771 203 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 SRSF7Q16629 238 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 ATP2B3Q16720 1220 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 UTP14CQ5TAP6 766 aaKnown RBP4.83□□□□□ -1.64
SCAF11-210ENST00000547654 CCDC30Q5VVM6 783 aa4.83□□□□□ -1.64
SCAF11-210ENST00000547654 CATSPERGQ6ZRH7 1159 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms