RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	MCL1	Q07820	350 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	EFHC2	Q5JST6	749 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	VWA5B1	Q5TIE3	1220 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	ATF7IP2	Q5U623	682 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	SHKBP1	Q8TBC3	707 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	VCPIP1	Q96JH7	1222 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	TRIM4	Q9C037	500 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	ASNSD1	Q9NWL6	643 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	STRIP2	Q9ULQ0	834 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	AFG3L2	Q9Y4W6	797 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	SNX9	Q9Y5X1	595 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	CREB3	O43889	395 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	NEK3	P51956	506 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	CDK16	Q00536	496 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	HSDL1	Q3SXM5	330 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	NXN	Q6DKJ4	435 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	ARFGAP1	Q8N6T3	406 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	OR6B3	Q8NGW1	331 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	APOL2	Q9BQE5	337 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	STK32B	Q9NY57	414 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	GOLGA8Q	A0A0J9YX86	632 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	GOLGA8O	A6NCC3	632 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	GOLGA8N	F8WBI6	632 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	OGT	O15294	1046 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	NPM3	O75607	178 aa	Known RBP	13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	MICAL2	O94851	1124 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	PSMG1	O95456	288 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	VTN	P04004	478 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	LINGO3	P0C6S8	592 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	UBA1	P22314	1058 aa	Known RBP	13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	ACVR2B	Q13705	512 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374		Q3C1V9	767 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	ARHGAP24	Q8N264	748 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	MPP5	Q8N3R9	675 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	BANP	Q8N9N5	519 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	RBM15B	Q8NDT2	890 aa	Known RBP	13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	DCAKD	Q8WVC6	231 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	CPSF2	Q9P2I0	782 aa	Known RBP	13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	C2CD2	Q9Y426	696 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	SNCAIP	Q9Y6H5	919 aa		13.5	□□□□□ -0.25
BRF1-210	ENST00000547374	MED7	O43513	233 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	TCEA3	O75764	348 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	SNRPA	P09012	282 aa	Known RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	GMPS	P49915	693 aa	Predicted RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	PGGT1B	P53609	377 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	STX3	Q13277	289 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	TCEAL1	Q15170	157 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	AP1AR	Q63HQ0	302 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	BRSK2	Q8IWQ3	736 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	RTKN2	Q8IZC4	609 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	GSTCD	Q8NEC7	633 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	FLAD1	Q8NFF5	587 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	SLC35B2	Q8TB61	432 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	NDRG1	Q92597	394 aa	Known RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	INPP5D	Q92835	1189 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	KLC2	Q9H0B6	622 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	KANSL3	Q9P2N6	904 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	CACNA2D1	P54289	1103 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	PTPN11	Q06124	597 aa	Predicted RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	AP1B1	Q10567	949 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	SLC30A9	Q6PML9	568 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	C15orf39	Q6ZRI6	1047 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	TREML1	Q86YW5	311 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	MAP7D3	Q8IWC1	876 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	MAB21L3	Q8N8X9	362 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	FAM172A	Q8WUF8	416 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	WDR83	Q9BRX9	315 aa	Known RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	FOXP3	Q9BZS1	431 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	DNAJC16	Q9Y2G8	782 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	MTO1	Q9Y2Z2	717 aa	Known RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	hCG_2014768	A0A024R1R8	64 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374		A6NJR5	290 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	SORBS2	O94875	1100 aa	Known RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	C6orf222	P0C671	652 aa	Predicted RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	ALAD	P13716	330 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	TCN1	P20061	433 aa	Predicted RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	ATP6V1C1	P21283	382 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	OLIG2	Q13516	323 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	CA9	Q16790	459 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	PARP6	Q2NL67	630 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	RABGAP1L	Q5R372	815 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	EFCAB12	Q6NXP0	572 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	ADGRD1	Q6QNK2	874 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	KDELC2	Q7Z4H8	507 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	NAT8L	Q8N9F0	302 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	APOPT1	Q96IL0	206 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	SPATA33	Q96N06	139 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	NDE1	Q9NXR1	346 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	DRG1	Q9Y295	367 aa	Known RBP	13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	AK5	Q9Y6K8	562 aa		13.49	□□□□□ -0.25
BRF1-210	ENST00000547374	CNTNAP2	Q9UHC6	1331 aa		13.48	□□□□□ -0.25
BRF1-210	ENST00000547374	HCRT	O43612	131 aa		13.48	□□□□□ -0.25
BRF1-210	ENST00000547374	SDC4	P31431	198 aa		13.48	□□□□□ -0.25
BRF1-210	ENST00000547374	BBS12	Q6ZW61	710 aa		13.48	□□□□□ -0.25
BRF1-210	ENST00000547374	SLC26A11	Q86WA9	606 aa		13.48	□□□□□ -0.25
BRF1-210	ENST00000547374	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.48	□□□□□ -0.25
BRF1-210	ENST00000547374	NDST1	P52848	882 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms