RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 MAFAQ8NHW3 353 aaPredicted RBP3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 MAP4K1Q92918 833 aa3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 STK31Q9BXU1 1019 aa3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 EBF3Q9H4W6 596 aa3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 STK32BQ9NY57 414 aa3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 CPNE7Q9UBL6 633 aa3.96□□□□□ -1.78
RAB3IP-209ENST00000547055 CFAP69A5D8W1 941 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 EXOC5O00471 708 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 CCP110O43303 1012 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 HGFP14210 728 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 ZKSCAN1P17029 563 aaPredicted RBP3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 SCP2P22307 547 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 KLRC1P26715 233 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 TKTP29401 623 aaKnown RBP3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 IGBP1P78318 339 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 TRIM71Q2Q1W2 868 aaKnown RBP3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 TMTC4Q5T4D3 741 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 VSTM1Q6UX27 236 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 RANBP10Q6VN20 620 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 LIX1LQ8IVB5 337 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 C16orf71Q8IYS4 520 aaPredicted RBP3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 SAMD14Q8IZD0 417 aaPredicted RBP3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 LINC01465Q8N7H1 131 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 NGDNQ8NEJ9 315 aaKnown RBP3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 NSMCE1Q8WV22 266 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 C22orf23Q9BZE7 217 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 TMEM60Q9H2L4 133 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 TRIM36Q9NQ86 728 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 HDAC9Q9UKV0 1011 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 TPCN1Q9ULQ1 816 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 MAFFQ9ULX9 164 aa3.95□□□□□ -1.78
RAB3IP-209ENST00000547055 FER1L4A9Z1Z3 1794 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 LY6G6EA0A0G2JKS1 128 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 TRIM43BA6NCK2 446 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 ISM1B1AKI9 464 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 FAM227AF5H4B4 570 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 H3BNC9 293 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 RRP9O43818 475 aaKnown RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 PIAS2O75928 621 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 CYP19A1P11511 503 aaPredicted RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 GATMP50440 423 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 PGDP52209 483 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 TIAL1Q01085 375 aaKnown RBP eCLIP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 ID2Q02363 134 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 STK3Q13188 491 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 RAPGEF1Q13905 1077 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 ARHGEF7Q14155 803 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 KCNB1Q14721 858 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 MFSD13AQ14CX5 517 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 CNN3Q15417 329 aaKnown RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 SEC23BQ15437 767 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 TWIST1Q15672 202 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 CC2D1BQ5T0F9 858 aaKnown RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 ANO7Q6IWH7 933 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 APOA5Q6Q788 366 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 ANKRD13AQ8IZ07 590 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 CHPFQ8IZ52 775 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 KIAA0319LQ8IZA0 1049 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 SMCR8Q8TEV9 937 aaPredicted RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 TRIM43Q96BQ3 446 aaPredicted RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 NMD3Q96D46 503 aaKnown RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 WDYHV1Q96HA8 205 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 FOXP1Q9H334 677 aaPredicted RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 TMEM184CQ9NVA4 438 aa3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 NKX1-2Q9UD57 310 aaPredicted RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 AFF4Q9UHB7 1163 aaKnown RBP3.94□□□□□ -1.78
RAB3IP-209ENST00000547055 ZMYM2Q9UBW7 1377 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 RAB27BO00194 218 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 CLIC1O00299 241 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 U2AF1L5P0DN76 240 aaPredicted RBP3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 CD19P15391 556 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 HTRA4P83105 476 aaPredicted RBP3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 U2AF1Q01081 240 aaKnown RBP eCLIP3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 CFHR3Q02985 330 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 SLC29A2Q14542 456 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 NPY5RQ15761 445 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 CNGA2Q16280 664 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 ZNF750Q32MQ0 723 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 C3orf38Q5JPI3 329 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 RUNDC1Q96C34 613 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 VCPIP1Q96JH7 1222 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 GAR1Q9NY12 217 aaKnown RBP3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 NOB1Q9ULX3 412 aaKnown RBP3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 L1RE1Q9UN81 338 aa3.93□□□□□ -1.78
RAB3IP-209ENST00000547055 AGPSO00116 658 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 FRS3O43559 492 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 TLR2O60603 784 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 PARP1P09874 1014 aaKnown RBP3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 ATF7P17544 494 aaPredicted RBP3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 TPH1P17752 444 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 ACVR2AP27037 513 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 CPT1AP50416 773 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 LINC00205P59089 165 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 RPS16P62249 146 aaKnown RBP3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 MINDY4Q4G0A6 757 aa3.92□□□□□ -1.78
RAB3IP-209ENST00000547055 RUSC1-AS1Q66K80 236 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms