RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 USP41Q3LFD5 358 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 UNC5AQ6ZN44 842 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 ZNF574Q6ZN55 896 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 NIPA1Q7RTP0 329 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 AGBL5Q8NDL9 886 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 HASPINQ8TF76 798 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 LENG9Q96B70 501 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 PGBD4Q96DM1 585 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 CHFRQ96EP1 664 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 FAM167AQ96KS9 214 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 ZSWIM3Q96MP5 696 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 FAM193BQ96PV7 902 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 SH2D3AQ9BRG2 576 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 TRMT61BQ9BVS5 477 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 EIF2AQ9BY44 585 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 GPATCH2Q9NW75 528 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 ADAM28Q9UKQ2 775 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 MRPS23Q9Y3D9 190 aaKnown RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 HES2Q9Y543 173 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 IPPQ9Y573 584 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
CCDC60-205ENST00000546345 USP9XQ93008 2570 aaPredicted RBP7.29□□□□□ -1.24
CCDC60-205ENST00000546345 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 WDR27A2RRH5 827 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 KIF2AO00139 706 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 IFIT3O14879 490 aaKnown RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 DCLK1O15075 740 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 NEMFO60524 1076 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 AKAP3O75969 853 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 SDSP20132 328 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 IGFBP6P24592 240 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 CD96P40200 585 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 VIPR2P41587 438 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 CREMQ03060 361 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 IKZF1Q13422 519 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 LRRC32Q14392 662 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 PSMD5Q16401 504 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 PPP2R5EQ16537 467 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 AXDND1Q5T1B0 1012 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 DAB2IPQ5VWQ8 1189 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 WWC2Q6AWC2 1192 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 NFXL1Q6ZNB6 911 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 CATSPER4Q7RTX7 472 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 PIP4P1Q86T03 277 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 ZNF410Q86VK4 478 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 PLA2G4DQ86XP0 818 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 TICAM2Q86XR7 235 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 NLRP4Q96MN2 994 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 NXF3Q9H4D5 531 aaKnown RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 ATP13A1Q9HD20 1204 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 TMEM9BQ9NQ34 198 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 SUCOQ9UBS9 1254 aaKnown RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 SEC63Q9UGP8 760 aaKnown RBP7.28□□□□□ -1.24
CCDC60-205ENST00000546345 MGAQ8IWI9 3026 aa7.28□□□□□ -1.24
CCDC60-205ENST00000546345 SF3B1O75533 1304 aaKnown RBP eCLIP7.27□□□□□ -1.24
CCDC60-205ENST00000546345 TEP1Q99973 2627 aaKnown RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MYBPHLA2RUH7 354 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 SPECC1L-ADORA2AF8WAN1 911 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 DDAH1O94760 285 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 CCDC192P0DO97 292 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 PSMC3P17980 439 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 RXRAP19793 462 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 SMARCA1P28370 1054 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MLLT6P55198 1093 aaPredicted RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 CREB5Q02930 508 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 CLEC16AQ2KHT3 1053 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MCTP1Q6DN14 999 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 CWC27Q6UX04 472 aaKnown RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 HEATR3Q7Z4Q2 680 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 RHPN2Q8IUC4 686 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 CHCHD4Q8N4Q1 142 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 C19orf47Q8N9M1 422 aaKnown RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 IGDCC4Q8TDY8 1250 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 DEPDC1BQ8WUY9 529 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 HNRNPLLQ8WVV9 542 aaKnown RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 LRIG1Q96JA1 1093 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MAP3K14Q99558 947 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MKRN2Q9H000 416 aaKnown RBP7.27□□□□□ -1.25
CCDC60-205ENST00000546345 CXCL16Q9H2A7 254 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 ZFP14Q9HCL3 533 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 MYOFQ9NZM1 2061 aa7.27□□□□□ -1.25
CCDC60-205ENST00000546345 ZMYM2Q9UBW7 1377 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 A0A1W2PQH9 124 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 ARHGEF37A1IGU5 675 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 EDIL3O43854 480 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 TSPAN1O60635 241 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 CYP21A2P08686 494 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 TPP2P29144 1249 aaPredicted RBP7.26□□□□□ -1.25
CCDC60-205ENST00000546345 SIM1P81133 766 aaPredicted RBP7.26□□□□□ -1.25
CCDC60-205ENST00000546345 CUL4AQ13619 759 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 RAB33AQ14088 237 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 PLCL1Q15111 1095 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 PON2Q15165 354 aa7.26□□□□□ -1.25
CCDC60-205ENST00000546345 NAB2Q15742 525 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms