RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 FBXO28Q9NVF7 368 aa8.19□□□□□ -1.1
UBR1-202ENST00000546274 GID8Q9NWU2 228 aa8.19□□□□□ -1.1
UBR1-202ENST00000546274 DDX56Q9NY93 547 aaKnown RBP8.19□□□□□ -1.1
UBR1-202ENST00000546274 PIM2Q9P1W9 311 aa8.19□□□□□ -1.1
UBR1-202ENST00000546274 PARP2Q9UGN5 583 aa8.19□□□□□ -1.1
UBR1-202ENST00000546274 ZNF536O15090 1300 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 KIAA1217Q5T5P2 1943 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 FAM47DPA6NHR8 397 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 A8MXQ7 604 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 FSCN2O14926 492 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 EDF1O60869 148 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 KRT75O95678 551 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 PRKACBP22694 351 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 PIK3CAP42336 1068 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 MXI1P50539 228 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 NCKAP1LP55160 1127 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 LMNB2Q03252 620 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ADRM1Q16186 407 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 UGCGQ16739 394 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 STYK1Q6J9G0 422 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 POTEHQ6S545 545 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 OTOAQ7RTW8 1153 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 HAUS6Q7Z4H7 955 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 NLRX1Q86UT6 975 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CBWD2Q8IUF1 395 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CCDC105Q8IYK2 499 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 C4orf33Q8N1A6 199 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GDPD5Q8WTR4 605 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 MTBPQ96DY7 904 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 SERPINB12Q96P63 405 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ROPN1BQ9BZX4 212 aaPredicted RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 RBM38Q9H0Z9 239 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 ROPN1Q9HAT0 212 aaPredicted RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 GPRC5CQ9NQ84 441 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 HACD3Q9P035 362 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 PKD2L1Q9P0L9 805 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GTF3C4Q9UKN8 822 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 TLL2Q9Y6L7 1015 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CNTNAP1P78357 1384 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GOLGA8IPA6NC78 632 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CAPN8A6NHC0 703 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GOLGA8JA6NMD2 632 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CLDN3O15551 220 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CHEK2O96017 543 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CDH2P19022 906 aaPredicted RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 KDSRQ06136 332 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 PDAP1Q13442 181 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 ALCAMQ13740 583 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GK3PQ14409 553 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 TBC1D10BQ4KMP7 808 aaPredicted RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ELMSAN1Q6PJG2 1045 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 NSMFQ6X4W1 530 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 RSPH3Q86UC2 560 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ZNF410Q86VK4 478 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 LDHDQ86WU2 507 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CDAN1Q8IWY9 1227 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GOLM1Q8NBJ4 401 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 PDZD8Q8NEN9 1154 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 MAK16Q9BXY0 300 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 GLIS2Q9BZE0 524 aaPredicted RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 OSBPL6Q9BZF3 934 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ALG13Q9NP73 1137 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 SLC38A7Q9NVC3 462 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 HERC5Q9UII4 1024 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 NAALADL1Q9UQQ1 740 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 COQ4Q9Y3A0 265 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 MRPL11Q9Y3B7 192 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 SIP14410 1827 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ARHGAP42A6NI28 874 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 YDJCA8MPS7 323 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 XPO1O14980 1071 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 BUD23O43709 281 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 PLA2G6O60733 806 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 GUCY1B2O75343 617 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CALCAP01258 141 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ENO1P06733 434 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 C6orf222P0C671 652 aaPredicted RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 CETPP11597 493 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 SERPINB6P35237 376 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CETN1Q12798 172 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CYP2A13Q16696 494 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 AOC3Q16853 763 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 LPCAT2Q7L5N7 544 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 MCF2L2Q86YR7 1114 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 PPM1KQ8N3J5 372 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 TTC39CQ8N584 583 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 C1orf54Q8WWF1 131 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
UBR1-202ENST00000546274 HPS1Q92902 700 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 TMIGD2Q96BF3 282 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 RUNDC3BQ96NL0 473 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 KLHL25Q9H0H3 589 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 SMYD3Q9H7B4 428 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 ANLNQ9NQW6 1124 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 CHST7Q9NS84 486 aa8.18□□□□□ -1.1
UBR1-202ENST00000546274 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms